Job Description P23522 Confidence 29.86% Date Wed Jan 25 15:20:43 GMT 2012
Rank 411 Aligned Residues 108
% Identity 7% Template c3cg0A_
PDB info
PDB header: lyaseChain: A: PDB Molecule: response regulator receiver modulated diguanylate cyclase
PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding
Resolution 2.15 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
2 . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . .
50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
N N D V F P N K F K A A L A A K Q V Q I G C W S A L S N P I S T E V L G L A G F D W L V L D G E .
H A P N D I S T F I P Q L M A L K G S A S A P V V R V P T N E
Query Conservation  
                                                                  .                                                
Alig confidence  
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Template Conservation  
                              .                                                                         . .                    
Template Sequence  
D G R L A A A T L R I Q L E S L G Y D V .
L G V F D N G E E A V R C A P D L R P D I A L V D I M L C G A L D G V E T A A R L A A .
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G C N L P I I F I T S S Q D
Template Known Secondary structure  
T . S S S S S S S S . . S
Template Predicted Secondary structure  
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Template SS confidence  
   
15 . . . . 20 . . . . . . . . . 30 . . . .
. . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . .
. . 80 . . . . . . . . . 90 .
 
   
81 . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
P V I I K R L L D I G F Y N F L I P F V E T K E E A E L A V A S T
Query Conservation  
                             
Alig confidence  
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Template Conservation  
                            .                        
Template Sequence  
V E T F Q R A K R V N P F G Y .
L A K P V A A D T L H R S I E M A
Template Known Secondary structure  
T T S . S S
Template Predicted Secondary structure  
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Template SS confidence  
   
92 . . . . . . . 100 . . . . . .
. . . 110 . . . . . . . . . 120 . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]