Return to main results Retrieve Phyre Job Id

Job DescriptionP23522
Confidence75.99%DateWed Jan 25 15:20:43 GMT 2012
Rank198Aligned Residues111
% Identity11%Templatec3c3mA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of the n-terminal domain of response regulator2 receiver protein from methanoculleus marisnigri jr1
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60........ .70.........80
Predicted Secondary structure 


























.







Query SS confidence 


































































.











Query Sequence  NNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGS. ASAPVVRVPTNE
Query Conservation        
  
  
  
    
      

   
  
  
 
 
 

 

           
 
    .
    


    
Alig confidence 
















..















































.











Template Conservation 
       
   
   
..  
  
     
         
 

 
       
      

         

  
    
Template Sequence  DSPXIVDVFVTXLERGG. . YRPITAFSGEECLEALNATPPDLVLLDIXXEPXDGWETLERIKTDPATRDIPVLXLTAKPL
Template Known Secondary structure  S
TT..
SSS

SS

SSS
STTTTTS
SS

Template Predicted Secondary structure 



..



























Template SS confidence 















































































   10.........20...... ...30.........40.........50.........60.........70.........80.......
 
   81........90.........100.........110....
Predicted Secondary structure 










Query SS confidence 

































Query Sequence  PVIIKRLLDIGFYNFLIPFVETKEEAELAVASTR
Query Conservation     
   

 

 




 
 




   
 
  
Alig confidence 

































Template Conservation            
    
 

     
   
   
 
Template Sequence  TPEEANEYGSYIEDYILKPTTHHQLYEAIEHVLA
Template Known Secondary structure 
TTTT
S


S
Template Predicted Secondary structure 







Template SS confidence 

































   88.90.........100.........110.........120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions