Job Description P23522 Confidence 43.95% Date Wed Jan 25 15:20:43 GMT 2012 Rank 354 Aligned Residues 124 % Identity 17% Template c3b4uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from agrobacterium2 tumefaciens str. c58 Resolution 1.20 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																																																					.
Query SS confidence																							.	.	.	.	.	.																																																					.
Query Sequence		P	V	I	I	K	R	L	L	D	I	G	F	Y	N	F	L	I	P	F	V	E	.	.	.	.	.	.	T	K	E	E	A	E	L	A	V	A	S	T	R	Y	P	P	E	G	I	R	G	V	S	V	S	H	R	A	N	M	F	G	T	V	A	D	Y	F	A	Q	S	N	K	N	I	T	I	L	V	Q	I	E	.
Query Conservation																							.	.	.	.	.	.																																																					.
Alig confidence																							.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	H	A	R	R	C	L	S	N	G	C	D	S	V	T	L	F	G	T	T	G	E	G	C	S	V	G	S	R	E	R	Q	A	I	L	S	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	A	G	I	A	P	S	R	I	V	T	G	V	L	V
Template Known Secondary structure											T	T		S					S	S	T	T	T	T	G	G	G	S		T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T			G	G	G
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.																										.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
			154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.									.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.																																																															.	.	.	.	.	.	.	.
Query SS confidence		.																																																															.	.	.	.	.	.	.	.
Query Sequence		.	S	Q	Q	G	V	D	N	V	D	A	I	A	A	T	E	G	V	D	G	I	F	V	G	P	S	D	L	A	A	A	L	G	H	L	G	N	A	S	H	P	D	V	Q	K	A	I	Q	H	I	F	N	R	A	S	A	H	G	K	P	S	G	I	.	.	.	.	.	.	.	.	L	A	P	V	E	A	D	A	R
Query Conservation		.																																																															.	.	.	.	.	.	.	.
Alig confidence		.																														.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		D	S	I	E	D	A	A	D	Q	S	A	E	A	L	N	A	G	A	R	N	I	L	L	A	P	P	S	Y	F	K	.	.	.	.	.	.	N	V	S	D	D	G	L	F	A	W	F	S	A	V	F	S	K	I	G	K	D	A	R	D	I	L	V	Y	N	I	P	S	V	T	M	V	T	L	S	V	E	L	V	G
Template Known Secondary structure		S	S														T	T		S									S	S		.	.	.	.	.	.	S																			T	T														S
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	L	E	W	G	A	T	F	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	K	A	A	F	P	G	I	V	T
Template Known Secondary structure								T	T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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