Job Description P23522 Confidence 31.54% Date Wed Jan 25 15:20:43 GMT 2012 Rank 402 Aligned Residues 118 % Identity 16% Template c2yxgD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihyrodipicolinate synthase (dapa) Resolution 2.20 Å

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		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.																																																					.	.	.
Query SS confidence																					.	.	.	.	.	.																																																					.	.	.
Query Sequence		I	I	K	R	L	L	D	I	G	F	Y	N	F	L	I	P	F	V	E	.	.	.	.	.	.	T	K	E	E	A	E	L	A	V	A	S	T	R	Y	P	P	E	G	I	R	G	V	S	V	S	H	R	A	N	M	F	G	T	V	A	D	Y	F	A	Q	S	N	K	N	I	T	I	L	V	Q	I	E	.	.	.
Query Conservation																					.	.	.	.	.	.																																																					.	.	.
Alig confidence																					.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	N	F	L	I	E	N	G	V	S	G	I	V	A	V	G	T	T	G	E	S	P	T	L	S	H	E	E	H	K	K	V	I	E	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	V	V	N	G	R	V	Q	V	I	A	G	A	G	S	N	C
Template Known Secondary structure									T	T		S					S	S	T	T	T	T	G	G	G	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S	S									S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																										.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.									.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.
Query Sequence		S	Q	Q	G	V	D	N	V	D	A	I	A	A	T	E	G	V	D	G	I	F	V	G	P	S	D	L	A	A	A	L	G	H	L	G	N	A	S	H	P	D	V	Q	K	A	I	Q	H	I	F	N	R	A	S	A	H	G	K	P	S	G	I	.	.	.	.	.	.	.	.	L	A	P	V	E	A	D	A	R	R
Query Conservation																																																																.	.	.	.	.	.	.	.
Alig confidence																.										.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation																.										.	.	.	.	.	.	.	.	.	.
Template Sequence		T	E	E	A	I	E	L	S	V	F	A	E	D	V	.	G	A	D	A	V	L	S	I	T	.	.	.	.	.	.	.	.	.	.	P	Y	Y	N	K	P	T	Q	E	G	L	R	K	H	F	G	K	V	A	E	S	I	N	L	P	I	V	L	Y	N	V	P	S	R	T	A	V	N	L	E	P	K	T	V	K	L
Template Known Secondary structure																.	T		S							.	.	.	.	.	.	.	.	.	.			S	S																			S	S												S
Template Predicted Secondary structure																.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.											.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	E	W	G	A	T	F	V	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	E	E	Y	S	N	I	S	A	V
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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