Job Description P23522 Confidence 41.33% Date Wed Jan 25 15:20:43 GMT 2012 Rank 361 Aligned Residues 129 % Identity 23% Template c2y0fD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27 Resolution 2.50 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		V	I	I	K	R	L	L	D	I	G	F	Y	N	F	L	I	P	F	V	E	T	K	E	E	A	E	L	A	V	A	S	T	R	Y	P	P	E	G	I	R	G	V	S	V	S	H	R	A	N	M	F	G	T	V	A	D	Y	F	A	Q	S	N	K	N	I	T	I	L	V	Q	I	.	.	E	S	Q	Q	G	V	D
Query Conservation																																																																									.	.
Alig confidence														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	V	L	E	L	H	R	A	G	S	E	.	I	V	R	L	T	V	N	D	E	E	A	A	K	A	V	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	R	R	L	L	A	E	G	V	E	V	P	L	V	G	D	F	H	F	N	G	H	L	L	L	R
Template Known Secondary structure										T	T		S	.								S					T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T										S	S
Template Predicted Secondary structure														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70																								.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	D	A	I	A	A	T	E	G	V	D	G	I	F	V	G	P	S	D	L	A	A	A	L	G	H	L	G	N	A	S	H	P	D	V	Q	K	A	I	Q	H	I	F	N	R	A	S	A	H	G	K	P	S	G	I	L	A	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	P	K	M	A	E	.	.	A	L	D	K	F	R	I	N	P	E	H	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	I	R	I	A	M	D	L	G	K	P	V	R	I	G	A	N	W	G	S	L	D	P	A	L	L	T	E	L	M	D	R	N	A	S	R	P	E
Template Known Secondary structure									.	.			S								T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T									G	G	G	S															S	S	S
Template Predicted Secondary structure									.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.																				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
																		220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.				.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.				.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	D	A	R	R	Y	L	E	W	G	A	T	F	.	.	.	.	V	A	V	.	G	S	D	L	G	V	F	R	S	A	T	Q	K	L	A	D	T	F	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.				.
Template Conservation
Template Sequence		P	K	S	A	H	E	V	V	L	E	A	L	V	E	S	A	V	R	A	Y	E	A	A	L	E	M	G	L	G	E	D	K	L	V	L	S	A	K	V	S	K	A	R	D	L	V	W	V	Y	R	E	L	A	R	R	T	Q
Template Known Secondary structure																															G	G	G							B	S	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions