Job Description P23522 Confidence 53.62% Date Wed Jan 25 15:20:43 GMT 2012 Rank 323 Aligned Residues 101 % Identity 19% Template c2qzjC_ PDB info PDB header:transcription Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile Resolution 2.89 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	A	A	L	A	A	K	Q	V	Q	I	G	C	W	S	A	L	S	N	P	I	S	T	E	V	L	G	L	A	G	F	D	W	L	V	L	D	G	E	H	A	P	N	D	I	S	T	F	I	P	Q	L	M	A	L	K	G	S	A	S	A	P	V	V	R	V	P	T	N	E	P	V	I	I	K	R	L	L	D
Query Conservation
Alig confidence																	.	.																																						.	.
Template Conservation																	.	.																																						.	.
Template Sequence		L	K	G	F	L	E	E	K	G	I	S	I	D	L	A	.	.	Y	N	C	E	E	A	I	G	K	I	F	S	N	K	Y	D	L	I	F	L	E	I	I	L	S	D	G	D	G	W	T	L	C	K	K	I	R	.	.	N	V	T	T	C	P	I	V	Y	X	T	Y	I	N	E	D	Q	S	I	L	N	A	L	N
Template Known Secondary structure									T	T							.	.		S										T				S						S			T	T												.	.					S							S
Template Predicted Secondary structure																	.	.																																						.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	F	Y	N	F	L	I	P	F	V	E	T	K	E	E	A	E	L	A	V	A	S	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	G	D	D	Y	L	I	K	P	L	N	L	E	I	L	Y	A	K	V	K	A	I	L	R
Template Known Secondary structure		T	T		S					S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions