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Job DescriptionP23522
Confidence29.53%DateWed Jan 25 15:20:43 GMT 2012
Rank414Aligned Residues89
% Identity12%Templatec2pz0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase (gdpd)2 from t. tengcongensis
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
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Query Sequence  ALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGF
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Template Sequence  KKMAPHLKIGLLYQCGLVEPWHMALRMEAYSLHPFYFNII. . . . . . PELVEGCKKNGVKLFPWT. VDRKEDMERMIKAGV
Template Known Secondary structure 
TTS
S

SSTTT
SBGGG

......TTT


B
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ST
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   161........170.........180.........190.........200 .........210........ .220.........230...
 
   93......100.........110.
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Query Sequence  YNFLIPFVETKEEAELAVA
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Template Sequence  DGII. . . TDDPETLINLVR
Template Known Secondary structure  S...S
T
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   234... ..240.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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