Return to main results Retrieve Phyre Job Id

Job DescriptionP23522
Confidence82.12%DateWed Jan 25 15:20:43 GMT 2012
Rank179Aligned Residues113
% Identity13%Templatec2gwrA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:dna-binding response regulator mtra; PDBTitle: crystal structure of the response regulator protein mtra from2 mycobacterium tuberculosis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  NNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEP
Query Conservation        
  
  
  
    
      

   
  
  
 
 
 

 

           
 
    
    


     
Alig confidence 
















..











































..














Template Conservation 
       
   
   
..  
       


        






 

   
      

 ..     

  
     
Template Sequence  DDASLAEXLTIVLRGEG. . FDTAVIGDGTQALTAVRELRPDLVLLDLXLPGXNGIDVCRVLRA. . DSGVPIVXLTAKTDT
Template Known Secondary structure  S
TT..


GGG

SSS
SSS
T..T



TT

Template Predicted Secondary structure 



..



















..













Template SS confidence 















































































   13......20......... 30.........40.........50.........60.........70... ......80........
 
   82.......90.........100.........110........
Predicted Secondary structure 














Query SS confidence 




































Query Sequence  VIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPE
Query Conservation    
   

 

 




 
 




   
 
  


 
Alig confidence 




































Template Conservation       
   
   

 

     
   
         
Template Sequence  VDVVLGLESGADDYIXKPFKPKELVARVRARLRRNDD
Template Known Secondary structure  S
TT

S





SS
Template Predicted Secondary structure 





















Template SS confidence 




































   8990.........100.........110.........120.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions