Job Description P23522 Confidence 27.81% Date Wed Jan 25 15:20:43 GMT 2012 Rank 424 Aligned Residues 185 % Identity 14% Template c1xfcB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: the 1.9 a crystal structure of alanine racemase from mycobacterium2 tuberculosis contains a conserved entryway into the active site Resolution 1.90 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		N	K	F	K	A	A	L	A	A	K	Q	V	Q	I	G	C	W	S	A	.	.	.	.	.	L	S	N	P	I	S	T	E	V	L	G	L	A	G	F	D	W	L	V	L	D	G	E	H	A	P	N	D	I	S	T	F	I	P	Q	L	M	A	L	K	G	S	A	S	A	P	V	V	R	V	P	T	N	E	P	V
Query Conservation																					.	.	.	.	.
Alig confidence									.	.											.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation									.	.																																				.	.	.	.	.	.	.	.	.
Template Sequence		R	V	L	R	E	H	A	.	.	G	H	A	Q	L	M	A	V	V	K	A	D	G	Y	G	H	G	A	T	R	V	A	Q	T	A	L	G	A	G	A	A	E	L	G	V	.	.	.	.	.	.	.	.	.	A	T	V	D	E	A	L	A	L	R	A	D	G	I	T	A	P	V	L	A	W	L	H	P	P	G	I
Template Known Secondary structure									.	.	T	T	S												T	T												T	T							.	.	.	.	.	.	.	.	.	S											T	T			S									T	T
Template Predicted Secondary structure									.	.																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.										.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	K	R	L	L	D	I	G	F	Y	N	F	L	I	P	F	V	E	T	K	E	E	A	E	L	A	V	A	S	T	R	Y	P	P	E	G	I	R	G	V	S	V	S	H	R	A	N	M	F	G	T	V	A	D	Y	F	A	Q	S	N	K	N	I	T	I	L	V	Q	I	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	G	P	A	L	L	A	D	V	.	.	.	.	Q	V	A	V	S	S	L	R	Q	L	D	E	L	L	H	A	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	G	R	T	A	T	V	T	V	K	V	D	T	G	L	N	R	N	G	V	G
Template Known Secondary structure									T	T		.	.	.	.						S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T									B		S	S			S	S	S	B
Template Predicted Secondary structure												.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																											.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
				153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.																																												.	.	.																	.
Query SS confidence		.	.																																												.	.	.																	.
Query Sequence		.	.	E	S	Q	Q	G	V	D	N	V	D	A	I	A	A	T	E	G	V	D	G	I	F	V	G	P	S	D	L	A	A	A	L	G	H	L	G	N	A	S	H	P	D	V	.	.	.	Q	K	A	I	Q	H	I	F	N	R	A	S	A	H	G	K	.	P	S	G	I	L	A	P	V	E	A	D	A	R	R	Y
Query Conservation		.	.																																												.	.	.																	.
Alig confidence		.	.																											.	.	.	.	.													.	.	.																	.
Template Conservation																														.	.	.	.	.
Template Sequence		P	A	Q	F	P	A	M	L	T	A	L	R	Q	A	M	A	E	D	A	V	R	L	R	G	L	M	S	H	.	.	.	.	.	M	V	Y	A	D	K	P	D	D	S	I	N	D	V	Q	A	Q	R	F	T	A	F	L	A	Q	A	R	E	Q	G	V	R	F	E	V	A	H	L	S	N	S	S	A	T	M	A	R
Template Known Secondary structure		T	T	T														T	T	S										.	.	.	.	.		S		S	S		T	T	S																				T	T				S
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	W	G	A	T	F	V	A	V	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	L	T	F	D	L	V	R	P	G	I
Template Known Secondary structure		G	G	G			S						G
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions