Job Description P23522 Confidence 99.73% Date Wed Jan 25 15:20:43 GMT 2012 Rank 31 Aligned Residues 208 % Identity 15% Template c1vbhA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate,orthophosphate dikinase; PDBTitle: pyruvate phosphate dikinase with bound mg-pep from maize Resolution 2.30 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.																													.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.
Predicted Secondary structure																								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		C	W	S	A	L	S	N	P	I	S	T	E	V	L	G	L	A	G	F	D	W	L	.	V	L	D	G	E	H	A	P	N	D	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	I	P	Q	L	M	A	L	K	G	.	S	A	S	A	P
Query Conservation																								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence																								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation
Template Sequence		V	L	A	N	A	D	T	P	D	D	A	L	T	A	R	N	N	G	A	Q	G	I	G	L	C	R	T	E	H	M	F	F	A	S	D	E	R	I	K	A	V	R	Q	M	I	M	A	P	T	L	E	L	R	Q	Q	A	L	D	R	L	L	P	Y	Q	R	S	D	F	E	G	I	F	R	A	M	D	G	L	P	V
Template Known Secondary structure								S										T	T			S						G	G	G	G	T	T	T															S	S																										T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
		73	.	.	.	.	.																																																										.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		V	V	R	V	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	P	V	I	I	K	R	L	L	D	I	G	F	Y	N	.
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		T	I	R	L	L	D	P	P	L	H	E	F	L	P	E	G	N	I	E	D	I	V	S	E	L	C	A	E	T	G	A	N	Q	E	D	A	L	A	R	I	E	K	L	S	E	V	N	P	M	L	G	F	R	G	C	R	L	G	I	S	Y	P	E	L	T	E	M	Q	A	R	A	I	F	E	A	A	I	A	M	T
Template Known Secondary structure								S		G	G	G	G	S			S																														S		G	G	G	S	S		T
Template Predicted Secondary structure
Template SS confidence
		619	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.
											95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	F	L	I	P	F	V	E	T	K	E	E	A	E	L	A	V	A	S	T	R	Y	P	P	E	G	I	R	G	V	S	V	S	H	R	A	N	M	F	G	T	V	A	D	Y	F	A	Q	S	.	.	.	N	K	N	I	T	I	L	V	Q	I	E	S	Q	Q	G	V	D	N	V	D
Query Conservation		.	.	.	.	.	.	.	.	.																																																	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Q	G	V	Q	V	F	P	E	I	M	V	P	L	V	G	T	P	Q	E	L	G	H	Q	V	T	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	V	A	E	K	V	F	A	N	V	G	K	T	I	G	Y	K	V	G	T	M	I	E	I	P	R	A	A	L	V	A	D
Template Known Secondary structure		T	T	T											S			S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T													S						T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		699	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.																				.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																	.	.	.	.	.	.	190	.	.	.								.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.																	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.																	.	.
Query Sequence		A	I	A	A	T	E	G	V	D	G	I	F	V	G	P	S	D	L	A	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	H	L	G	N	A	S	H	P	.	.	.	.	.	.	.	D	V	Q	K	A	I	Q	H	I	F	N	R	A	S	A	H	.	.	G	K	P	S	G	I	L	A
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.																	.	.
Alig confidence						.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.																	.	.
Template Conservation						.	.
Template Sequence		E	I	A	E	.	.	Q	A	E	F	F	S	F	G	T	N	D	L	T	Q	M	T	F	G	Y	S	R	D	D	V	G	K	F	I	P	V	Y	L	A	Q	G	I	L	Q	H	D	P	F	E	V	L	D	Q	R	G	V	G	E	L	V	K	F	A	T	E	R	G	R	K	A	R	P	N	L	K	V	G	I	C	G
Template Known Secondary structure				T	T	.	.	T		S															T							T	T	T							T	T	S		S	S		T	T	T	S			T	T	T																S	T	T							S
Template Predicted Secondary structure						.	.
Template SS confidence
		760	.	.	.			.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.
					218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	P	V	E	A	D	A	R	R	Y	L	E	W	G	A	T	F	V	A	V	G	S	D	L	G	V	F	R	S	A	T	Q	K	L	A
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		E	H	G	G	E	P	S	S	V	A	F	F	A	K	A	G	L	D	Y	V	S	C	S	P	F	R	V	P	I	A	R	L	A	A	A	Q	V
Template Known Secondary structure		G	G	G	G												T		S						G	G	G											T
Template Predicted Secondary structure
Template SS confidence
		838	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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