Return to main results Retrieve Phyre Job Id

Job DescriptionP23522
Confidence99.97%DateWed Jan 25 15:20:43 GMT 2012
Rank7Aligned Residues184
% Identity22%Templatec1sgjB_
PDB info PDB header:lyaseChain: B: PDB Molecule:citrate lyase, beta subunit; PDBTitle: crystal structure of citrate lyase beta subunit
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60..... ....70.........80..... ....
Predicted Secondary structure 














..........








...
Query SS confidence 










































. . . . . . . . . .



















. . .



Query Sequence  CWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMAL. . . . . . . . . . KGSASAPVVRVPTNEPVIIK. . . RLLD
Query Conservation        

   
  
  
 
 
 

 

           
 
 ..........   
    


       
 ...  

Alig confidence 










































..........



















...



Template Conservation 
 


       

   


 






 
       
  
                    



         

  
 
Template Sequence  LFAPGNRADLIAKLPRSAPDAVVIDLEDAVPGTAEAKAAARPVAHDAARDLIAAAPHLAVFVRVNALHSPYFEDDLSVLT
Template Known Secondary structure  TT
GGGG

SSSTTS
SSSTTS


TTSTTGGG

Template Predicted Secondary structure 



























Template SS confidence 















































































   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   90.........100.........110.........120.........130.........140.........150.........160.........
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  IGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEG
Query Conservation   

 




 
 




   
 
  


 
 

                    
    

  


  

 
  






Alig confidence 



















..........................

































Template Conservation      

 



     
   ..........................   
        
   


  
   
  
     
Template Sequence  PELSGVVVPKLEMGAEARQV. . . . . . . . . . . . . . . . . . . . . . . . . . AQMLQERSLPLPILAGLETGAGVWNAREIMEVPE
Template Known Secondary structure  TTSS
S


..........................TT




STTSTT
Template Predicted Secondary structure 








..........................












Template SS confidence 















































































   92.......100.........110. ........120.........130.........140.....
 
   170.........180.........190.........200.........210......... 220.........230..
Predicted Secondary structure 


















........



Query SS confidence 

















































. . . . . . . .












Query Sequence  VDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAPV. . . . . . . . EADARRYLEWGAT
Query Conservation 

 
 

  


  

       
 
  
   
  

   
   
     ........          
  
Alig confidence 

















































........












Template Conservation 
  
  
  

   

         
   
  
  

 
 
   

       
   
          

 
Template Sequence  VAWAYFGAEDYTTDLGGKRTPGGLEVLYARSQVALAARLTGVAALDIVVTALNDPETFRADAEQGRALGYS
Template Known Secondary structure 
T



SS
GGGT






S
TT

Template Predicted Secondary structure 




























Template SS confidence 






































































   146...150.........160.........170.........180.........190.........200.........210......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions