Job Description P23522 Confidence 42.51% Date Wed Jan 25 15:20:43 GMT 2012 Rank 357 Aligned Residues 88 % Identity 17% Template c1gthD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil Resolution 2.25 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.								.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.
Predicted Secondary structure																									.	.	.	.																		.	.	.	.	.	.	.					.	.	.	.	.																.
Query SS confidence																									.	.	.	.																		.	.	.	.	.	.	.					.	.	.	.	.																.
Query Sequence		K	F	K	A	A	L	A	A	K	Q	V	Q	I	G	C	W	S	A	L	S	N	P	I	.	.	.	.	S	T	E	V	L	G	L	A	G	F	D	W	L	V	L	D	G	.	.	.	.	.	.	.	E	H	A	P	.	.	.	.	.	N	D	I	S	T	F	I	P	Q	L	M	A	L	K	G	.	S	A	S	A
Query Conservation																									.	.	.	.																		.	.	.	.	.	.	.					.	.	.	.	.																.
Alig confidence								.																	.	.	.	.																		.	.	.	.	.	.	.					.	.	.	.	.																.
Template Conservation								.
Template Sequence		E	L	K	A	D	F	.	P	D	N	I	V	I	A	S	I	M	C	S	Y	N	K	N	D	W	M	E	L	S	R	K	A	E	A	S	G	A	D	A	L	E	L	N	L	S	C	P	H	G	M	G	E	R	G	M	G	L	A	C	G	Q	D	P	E	L	V	R	N	I	C	R	W	V	R	Q	A	V	Q	I	P
Template Known Secondary structure								.	T	T	S										S															T	T		S										S	S	G	G	G	G	T		T																						S	S
Template Predicted Secondary structure								.
Template SS confidence
		627	.	.	630	.	.		.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.
		72	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		P	V	V	R	V	P	T	N	E	.	.	.	P	V	I	I	K	R	L	L	D	I	G	F	Y	N	F	L	I
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		F	F	A	K	L	T	P	N	V	T	D	I	V	S	I	A	R	A	A	K	E	G	G	A	D	G	V	T	A
Template Known Secondary structure								S		S	S													T		S
Template Predicted Secondary structure
Template SS confidence
		706	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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