 |
| Job Description | P0A710 | | Confidence | 1.70% | Date | Thu Jan 5 11:04:25 GMT 2012 |
| Rank | 61 | Aligned Residues | 15 |
| % Identity | 40% | Template | c1zc1A_ |
| PDB info |
PDB header:protein turnover | Chain: A: PDB Molecule:ubiquitin fusion degradation protein 1; |
PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites
|
| Resolution | UNK |
|
| | |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
| Predicted Secondary structure | |
 | |
|
|
|
|
| | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
G | K | E | L | T | L | P | Q | P | V | W | S | K | L | N |
| Query Conservation | |
| | | | |
|
| | | |
| | |
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
| |
|
|
|
| |
| | |
| |
| Template Sequence | |
G | G | K | I | F | L | P | P | S | A | L | S | K | L | S |
| Template Known Secondary structure | |
S | S |  | | |  |
| | | | | | | | |
| Template Predicted Secondary structure | |
|
| | | | |
| | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
