Job Description P21170 Confidence 99.41% Date Thu Jan 5 11:37:56 GMT 2012 Rank 36 Aligned Residues 187 % Identity 19% Template d1vfsa2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 1.90

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	H	.	.	.	.	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A	H	A	G	M	T	R	S
Query Conservation																																										.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.												.	.	.	.														.																				.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.																													.																				.	.
Template Sequence		D	L	D	A	V	R	A	N	V	R	A	L	R	A	R	A	P	R	S	.	.	.	.	.	.	.	.	.	.	A	L	M	A	V	V	K	S	N	A	Y	G	H	G	A	V	P	C	A	R	A	A	Q	E	A	G	A	A	.	W	L	G	T	A	T	P	E	E	A	L	E	L	R	A	A	G	I	Q	.	.	G
Template Known Secondary structure															T	T	S	T	T	S	.	.	.	.	.	.	.	.	.	.												T	T													T			.					S	S										T	T			.	.	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																													.																				.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.											.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G	G	E	K	S	K	F	G	L	A	A
Query Conservation
Alig confidence																				.	.	.	.	.																																.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.																																.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	M	C	W	L	W	T	P	G	G	P	W	R	E	A	I	E	.	.	.	.	.	T	D	I	D	V	S	V	S	G	M	W	A	L	D	E	V	R	A	A	A	R	A	A	G	R	T	A	R	I	Q	L	.	A	D	T	G	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	G	C	Q	P
Template Known Secondary structure										T	T									.	.	.	.	.	T	T							S															T	S							.			S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																				.	.	.	.	.																																.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.														.	.	.	.	.	140
		248	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure														.	.	.																				.
Query SS confidence														.	.	.																				.
Query Sequence		T	Q	V	L	Q	L	V	E	T	L	R	E	.	.	.	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	M	A	.	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L	H	K	L	G	V	N	I	Q	C	F	D	V	G	G
Query Conservation														.	.	.																				.
Alig confidence														.	.	.					.															.
Template Conservation																					.
Template Sequence		A	D	W	A	E	L	V	G	A	A	V	A	A	Q	A	E	G	T	V	.	Q	V	T	G	V	W	S	H	F	A	C	A	D	E	P	G	H	P	S	I	R	L	Q	L	D	A	F	R	D	M	L	A	Y	A	E	K	E	G	V	D	P	E	V	R	H	I	A	N
Template Known Secondary structure																	T	T	S		.										S	S	T	T	S	T	T																					T	T				S
Template Predicted Secondary structure																					.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions