Job Description P21170 Confidence 99.22% Date Thu Jan 5 11:37:56 GMT 2012 Rank 40 Aligned Residues 170 % Identity 15% Template d1rcqa2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 1.45

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.
Query SS confidence																																									.	.	.	.
Query Sequence		F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	.	.	.	.	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A	H	A	G	M	T	R	S
Query Conservation																																									.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.											.	.	.	.									.						.																				.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.																							.						.																				.
Template Sequence		D	L	Q	A	L	R	H	N	Y	R	L	A	R	E	A	T	G	A	.	.	.	.	.	.	.	.	.	.	.	R	A	L	A	V	I	K	A	D	A	Y	G	H	G	A	V	R	C	A	E	A	L	.	A	A	E	A	D	.	G	F	A	V	A	C	I	E	E	G	L	E	L	R	E	A	G	I	R	.	Q	P
Template Known Secondary structure																			S	.	.	.	.	.	.	.	.	.	.	.												T	T										.	T	T	T		S	.					S	S										T	T			.	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.																							.						.																				.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.												.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G	G	E	K	S	K	F	G	L	A	A
Query Conservation
Alig confidence																				.	.	.	.	.																					.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.																					.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	L	L	E	G	F	F	E	A	S	E	L	E	L	I	V	A	.	.	.	.	.	H	D	F	W	C	V	V	H	C	A	W	Q	L	E	A	I	E	R	A	S	.	.	.	L	A	R	P	L	N	V	W	L	M	D	S	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	V	G	F	F	P
Template Known Secondary structure					T	T			S	S	G	G	G							.	.	.	.	.	T	T							S												.	.	.		S	S									S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S
Template Predicted Secondary structure																				.	.	.	.	.																					.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.														.	.	.	130	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	M	A	.	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L
Query Conservation																																	.
Alig confidence																			.														.
Template Conservation																			.
Template Sequence		E	D	F	R	A	A	H	E	R	L	R	A	S	G	K	V	A	.	K	I	V	M	M	S	H	F	S	R	A	D	E	L	D	C	P	R	T	E	E	Q	L	A	A	F	S	A	A	S	Q	G	L
Template Known Secondary structure														T	T				.									S	S	T	T		T	T		T														T	T
Template Predicted Secondary structure																			.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions