Job Description P21170 Confidence 100.00% Date Thu Jan 5 11:37:56 GMT 2012 Rank 20 Aligned Residues 242 % Identity 18% Template d1knwa2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.10

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.
Predicted Secondary structure																																																																												.	.	.	.
Query SS confidence																																																																												.	.	.	.
Query Sequence		F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A	H	A	G	M	T	.	.	.	.	R	S
Query Conservation																																																																												.	.	.	.
Alig confidence															.				.	.	.	.	.	.	.	.	.	.	.	.																								.	.																					.	.	.	.
Template Conservation															.				.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		D	A	Q	I	I	R	R	Q	I	A	A	L	K	.	Q	F	D	.	.	.	.	.	.	.	.	.	.	.	.	V	V	R	F	A	Q	K	A	C	S	N	I	H	I	L	R	L	M	R	E	Q	G	V	.	.	K	V	D	S	V	S	L	G	E	I	E	R	A	L	A	A	G	Y	N	P	Q	T	H	P	D	D
Template Known Secondary structure												T	T	T	.	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G													T	T		.	.						S										T	T			T	T	T		T	T	S
Template Predicted Secondary structure															.				.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.													.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	.	W	Q	S	S	G	G	E	K	S	K	F	G	L	A
Query Conservation																																																																			.
Alig confidence																				.	.	.	.	.																							.	.	.	.																	.
Template Conservation																				.	.	.	.	.																							.	.	.	.
Template Sequence		I	V	F	T	A	D	V	I	D	Q	A	T	L	E	R	V	S	E	.	.	.	.	.	L	Q	I	P	V	N	A	G	S	V	D	M	L	D	Q	L	G	Q	V	S	P	G	.	.	.	.	H	R	V	W	L	R	V	N	P	G	F	G	H	G	H	S	Q	K	T	N	T	G	G	E	N	S	K	H	G	I	W
Template Known Secondary structure							S													.	.	.	.	.		T						S	S											S	T	T	.	.	.	.										S			S	S		T	T	S			S	S	S	T	T				S
Template Predicted Secondary structure																				.	.	.	.	.																							.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	M	A	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L	H	K	L	G	V	N	I	Q	C	F	D	V	G	G	G	L	G	V	D	Y	E	G	T	R	S	Q	S	D	C
Query Conservation
Alig confidence																			.	.																			.	.	.	.																																							.
Template Conservation																			.	.																			.	.	.	.																																							.
Template Sequence		Y	T	D	L	P	A	A	L	D	V	I	Q	R	H	H	L	Q	.	.	L	V	G	I	H	M	H	I	G	S	G	V	D	Y	A	H	L	E	.	.	.	.	Q	V	C	G	A	M	V	R	Q	V	I	E	F	G	Q	D	L	Q	A	I	S	A	G	G	G	L	S	V	P	Y	Q	Q	G	E	E	A	V	D	.
Template Known Secondary structure		G	G	G											T	T			.	.											T	T							.	.	.	.														T				S													S	T	T						.
Template Predicted Secondary structure																			.	.																			.	.	.	.																																							.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	N	Y	G	L	N	E	Y	A	N	N	I	I	W	A	I	G	D	A	C	E	E	N	G	L	P	H	P	T	V	I	T	E	S	G	R	A	V	T	A	H	H	T
Query Conservation
Alig confidence		.	.	.	.	.																					.
Template Conservation		.	.	.	.	.																					.
Template Sequence		.	.	.	.	.	T	E	H	Y	Y	G	L	W	N	A	A	R	E	Q	I	A	R	H	L	G	.	H	P	V	K	L	E	I	E	P	G	R	F	L	V	A	Q	S	G
Template Known Secondary structure		.	.	.	.	.																				T	.	S									S					G	G	G
Template Predicted Secondary structure		.	.	.	.	.																					.
Template SS confidence
							241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions