Job Description P21170 Confidence 100.00% Date Thu Jan 5 11:37:56 GMT 2012 Rank 21 Aligned Residues 256 % Identity 23% Template d1hkva2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.6

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A	H	A	G	M	T	R	S	V	I	V	C
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.																												.	.
Template Conservation																		.	.	.	.	.	.	.	.	.																												.	.
Template Sequence		D	E	D	D	F	R	S	R	C	R	E	T	A	A	A	F	.	.	.	.	.	.	.	.	.	G	S	G	A	N	V	H	Y	A	A	K	A	F	L	C	S	E	V	A	R	W	I	S	E	E	G	L	.	.	C	L	D	V	C	T	G	G	E	L	A	V	A	L	H	A	S	F	P	P	E	R	I	T	L	H
Template Known Secondary structure																	T	.	.	.	.	.	.	.	.	.	T	S	G	G	G	B				G	G	G	S													T		.	.						S										T	T			G	G	G
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.																												.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.										.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	.	W	Q	S	S	G	G	E	K	S	K	F	G	L	A	A	T	Q	V
Query Conservation																																																															.
Alig confidence															.	.	.							.																																							.
Template Conservation															.	.	.							.
Template Sequence		G	N	N	K	S	V	S	E	L	T	A	A	V	.	.	.	K	A	G	V	G	H	.	I	V	V	D	S	M	T	E	I	E	R	L	D	A	I	A	G	E	A	G	I	V	Q	D	V	L	V	R	L	T	V	G	V	E	A	H	T	H	E	F	I	S	T	A	H	E	D	Q	K	F	G	L	S	V	A	S	G
Template Known Secondary structure			S	S											.	.	.			T				.					S															T												S						T						S	S			S	S	S	S			S	T	T	S
Template Predicted Secondary structure															.	.	.							.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		251	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.						.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure					.	.																																													.	.	.	.	.
Query SS confidence					.	.																																													.	.	.	.	.
Query Sequence		L	Q	L	.	.	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	M	A	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L	.	.	.	.	.	H	K	L	G	V	N	I	Q	C	F	D	V	G	G	G	L	G	V	D	Y	E	G	T	R	S	Q
Query Conservation					.	.																																													.	.	.	.	.
Alig confidence					.	.												.																																	.	.	.	.	.
Template Conservation																		.
Template Sequence		A	A	M	A	A	V	R	R	V	F	A	T	D	H	L	R	.	L	V	G	L	H	S	H	I	G	S	Q	I	F	D	V	D	G	F	E	L	A	A	H	R	V	I	G	L	L	R	D	V	V	G	E	F	G	P	E	K	T	A	Q	I	A	T	V	D	L	G	G	G	L	G	I	S	Y	L	P	S	D	D	P
Template Known Secondary structure														S	S			.															S																										S	T	T										B				S	S	T	T
Template Predicted Secondary structure																		.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	C	S	V	N	Y	G	L	N	E	Y	A	N	N	I	I	W	A	I	G	D	A	C	E	E	N	G	L	P	H	P	T	V	I	T	E	S	G	R	A	V	T	A	H	H
Query Conservation
Alig confidence				.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.
Template Sequence		P	P	.	.	.	.	.	.	I	A	E	L	A	A	K	L	G	T	I	V	S	D	E	S	T	A	V	G	L	P	T	P	K	L	V	V	E	P	G	R	A	I	A	G	P	G
Template Known Secondary structure				.	.	.	.	.	.																		T	T	T								B			S					S	T	T
Template Predicted Secondary structure				.	.	.	.	.	.
Template SS confidence
		270	.							.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions