Job Description P21170 Confidence 100.00% Date Thu Jan 5 11:37:56 GMT 2012 Rank 24 Aligned Residues 230 % Identity 22% Template d1f3ta2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A	H	A	G	M	T	R	S	V	I	V	C
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.																									.	.
Template Sequence		D	L	G	D	I	V	R	K	H	E	T	W	K	K	C	L	P	R	.	.	.	.	.	.	.	.	.	.	V	T	P	F	Y	A	V	K	C	N	D	D	W	R	V	L	G	T	L	A	A	L	G	T	.	.	G	F	D	C	A	S	N	T	E	I	Q	R	V	R	G	I	G	V	P	P	E	K	I	I	Y	A
Template Known Secondary structure																		T	T	.	.	.	.	.	.	.	.	.	.							G	G	G													T	T		.	.						S										T	T			G	G	G
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																									.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.											.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G	G	E	K	S	K	F	G	L	A	A	T	Q	V	L
Query Conservation
Alig confidence															.	.	.							.																			.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.							.																			.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	C	K	Q	I	S	H	I	R	Y	A	R	.	.	.	D	S	G	V	D	V	.	M	T	F	D	C	V	D	E	L	E	K	V	A	K	T	H	P	K	.	.	.	.	A	K	M	V	L	R	I	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	F	G	A	K	V	E	D	C	R
Template Known Secondary structure			S	S											.	.	.		T	T				.					S												T	T	.	.	.	.							B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		B
Template Predicted Secondary structure															.	.	.							.																			.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.																.	.	160	.	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	M	A	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L	H	K	L	G	V	N	I	Q	C	F	D	V	G	G	G	L	G	V	D	Y	E	G	T	R	S	Q	S	D	C	S	V	N	Y	G
Query Conservation
Alig confidence														.	.																																																							.	.	.	.	.	.	.	.	.
Template Conservation														.	.																																																							.	.	.	.	.	.	.	.	.
Template Sequence		F	I	L	E	Q	A	K	K	L	N	I	D	.	.	V	T	G	V	S	F	H	V	G	S	G	S	T	D	A	S	T	F	A	Q	A	I	S	D	S	R	F	V	F	D	M	G	T	E	L	G	F	N	M	H	I	L	D	I	G	G	G	F	P	G	T	R	D	A	.	.	.	.	.	.	.	.	.	P	L	K
Template Known Secondary structure										T	T			.	.										S			S		T																				T	T														S	S	T	T	S	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure														.	.																																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.										.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	E	Y	A	N	N	I	I	W	A	I	G	D	A	C	E	E	N	G	L	P	H	P	T	V	I	T	E	S	G	R	A	V	T	A	H	H
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		F	E	E	I	A	G	V	I	N	N	A	L	E	K	H	F	P	P	D	.	.	L	K	L	T	I	V	A	E	P	G	R	Y	Y	V	A	S	A
Template Known Secondary structure																	S				.	.	T	T								S					T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions