Job Description P21170 Confidence 99.03% Date Thu Jan 5 11:37:56 GMT 2012 Rank 47 Aligned Residues 189 % Identity 16% Template c3mubB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: the crystal structure of alanine racemase from streptococcus2 pneumoniae Resolution 2.00 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		R	L	P	A	L	F	C	F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	.	.	.	.	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A
Query Conservation																																																.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.											.	.	.	.									.						.
Template Conservation																												.	.	.	.	.	.	.	.	.	.																							.						.
Template Sequence		R	P	T	K	A	L	I	H	L	G	A	I	R	Q	N	I	Q	Q	M	G	A	H	I	P	Q	G	.	.	.	.	.	.	.	.	.	.	T	L	K	L	A	V	V	A	N	A	Y	G	H	G	A	V	A	V	A	K	A	I	.	Q	D	D	V	D	.	G	F	C	V	S	N	I	D	E	A	I	E	L	R	Q
Template Known Secondary structure		S	S																				T	S		T	T	.	.	.	.	.	.	.	.	.	.									T	T	T	T	T										.	G	G	G		S	.					S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.																							.						.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.											.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	G	M	T	R	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G	G	E	K
Query Conservation
Alig confidence												.	.														.	.	.	.	.																											.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.														.	.	.	.	.																											.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	L	S	K	P	I	L	I	L	.	.	G	V	S	E	I	E	A	V	A	L	A	K	E	.	.	.	.	.	Y	D	F	T	L	T	V	A	G	L	E	W	I	Q	A	L	L	D	K	E	V	D	L	T	G	L	.	.	.	.	T	V	H	L	I	D	S	G	M	G	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T			S						.	.	S				G	G	G							.	.	.	.	.		T																	T	T				T	T		.	.	.	.							S	S	S		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.														.	.	.	.	.																											.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		S	K	F	G	L	A	A	T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	M	A	N	I	R	D	I	A	T	G	.	V	R	E	S	A	R	F	Y	V	E	L	H	K	L	G	V	N	I	Q	C	F	D
Query Conservation																																																.
Alig confidence		.																								.																						.
Template Conservation		.																								.
Template Sequence		.	R	I	G	F	R	E	A	S	E	V	E	Q	A	Q	D	L	L	Q	Q	H	G	V	C	.	V	E	G	I	F	T	H	F	A	T	A	D	E	E	S	D	D	Y	F	N	A	Q	L	E	R	F	K	T	I	L	A	S	M	K	E	V	P	E	L	V	H	A	S	N
Template Known Secondary structure		.	S	S	S			S														T	T			.									S	S	T	T	S	S																				S	S			S
Template Predicted Secondary structure		.																								.
Template SS confidence
			136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions