Job Description P21170 Confidence 99.84% Date Thu Jan 5 11:37:56 GMT 2012 Rank 28 Aligned Residues 249 % Identity 13% Template c3llxA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:predicted amino acid aldolase or racemase; PDBTitle: crystal structure of an ala racemase-like protein (il1761) from2 idiomarina loihiensis at 1.50 a resolution Resolution 1.50 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	P	A	L	F	C	F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A	H	A	G
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.																							.
Template Conservation																																.	.	.	.	.	.	.	.	.																							.
Template Sequence		P	D	T	P	Y	L	L	I	D	E	A	K	L	K	S	N	I	N	Y	L	K	Q	R	V	E	S	L	G	S	H	.	.	.	.	.	.	.	.	.	L	R	P	H	L	T	L	R	T	L	E	A	A	G	Y	L	L	D	S	K	S	A	.	P	A	T	V	S	T	L	A	E	A	E	A	Y	A	K	A	G	Y
Template Known Secondary structure		S		S	S																							T	T			.	.	.	.	.	.	.	.	.	B			B					B									S	S	T	T	S	.					S	S										T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40										.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	R	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G	G	E	K	S	K	F
Query Conservation
Alig confidence																							.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	L	L	Y	A	V	G	I	A	P	A	K	L	K	R	V	A	A	L	R	.	.	.	Q	Q	G	I	N	L	H	I	L	L	D	N	I	T	Q	A	Q	A	V	V	D	Y	A	A	E	F	G	Q	D	F	S	V	F	I	E	I	D	S	D	D	H	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G
Template Known Secondary structure												G	G	G									.	.	.		T	T									S															T									B		S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																							.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.														.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.							.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.
Query Sequence		G	L	A	A	T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	.	.	.	.	.	.	S	Q	M	A	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L	H	K	L	G	V	N	I	Q	C	F	D	V	G	G	G	L	G	V	D	Y
Query Conservation																																	.	.	.	.	.	.
Alig confidence								.	.														.										.	.	.	.	.	.
Template Conservation								.	.														.
Template Sequence		G	I	K	P	S	D	.	.	S	K	L	L	T	I	A	K	T	L	G	E	H	.	F	T	G	L	X	T	H	A	G	G	S	Y	A	C	N	T	E	Q	G	L	K	N	F	A	K	Q	E	C	D	A	V	R	I	A	R	N	N	L	E	T	A	G	I	H	C	A	I	T	S	V	G	S	T	P	T	A	H	F
Template Known Secondary structure			B		T	T		.	.	T										G	G	G	.									G	G	G	G	G			S																									T	T
Template Predicted Secondary structure								.	.														.
Template SS confidence
		146	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		318	.	320	.	.	.	.	.	.						.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		E	G	T	R	S	Q	S	D	C	.	.	.	.	.	S	V	N	Y	G	L	N	E	Y	A	N	N	I	I	W	A	I	G	D	A	C	E	E	N	G	L	P	H	P	T	V	I	T	E	S	G	R	A	V	T	A	H	H	T	V	L	V	S	N	I	I	G	V	E	R	N	E	Y
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	D	F	S	D	I	S	E	V	R	A	G	V	Y	T	T	F	D	L	V	X	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	V	C	D	F	S	H	I	A	X	S	V	V	T	T	V	I	G	H	N	K	E	K	N
Template Known Secondary structure			S			T	T		S						G	G	G	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	S			G	G	G														T	T	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.																								.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions