Job Description P21170 Confidence 99.65% Date Thu Jan 5 11:37:56 GMT 2012 Rank 30 Aligned Residues 188 % Identity 10% Template c3kw3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from bartonella henselae with2 covalently bound pyridoxal phosphate Resolution 2.04 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		R	L	P	A	L	F	C	F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	.	.	.	.	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A
Query Conservation																																																.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.											.	.	.	.															.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		A	T	A	I	A	T	I	D	V	R	A	I	V	A	N	Y	R	T	L	A	Q	H	V	A	P	.	.	.	.	.	.	.	.	.	.	.	T	E	C	S	A	V	V	A	N	A	Y	G	L	G	A	H	K	I	A	P	A	L	Y	Q	A	G	C	R	.	T	F	F	V	A	Q	I	E	E	A	L	Q	L	K	A
Template Known Secondary structure			S																						T	T	.	.	.	.	.	.	.	.	.	.	.	S								T	T	T	T	T												T	T			.					S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.												40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	G	M	T	R	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G	G	E	K
Query Conservation
Alig confidence												.															.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.															.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	P	E	N	V	M	I	A	L	.	L	N	G	F	P	H	K	A	E	E	F	V	A	Q	.	.	.	.	.	S	G	I	I	P	L	L	N	S	W	S	T	I	E	D	W	Q	T	L	C	Q	K	K	N	K	K	F	P	A	I	I	Q	V	D	T	N	M	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S		S	S						.	T	T				T	T								.	.	.	.	.	T	T							S															T									B		S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.															.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		S	K	F	G	L	A	A	T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	M	A	.	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L	H	K	L	G	V	N	I
Query Conservation																																								.
Alig confidence																										.														.
Template Conservation																										.
Template Sequence		S	R	L	G	L	D	K	K	E	L	Q	K	L	I	K	N	P	T	I	F	E	K	A	E	.	I	K	Y	I	L	S	H	L	A	N	G	E	D	A	S	H	S	S	N	N	K	Q	L	A	A	F	K	R	V	L	A	Q	L	P	T	C	K	V	S	F
Template Known Secondary structure			S	S	S	B													T					S		.									S	S	T	T		S	S		T															T	S
Template Predicted Secondary structure																										.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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