Job Description P21170 Confidence 99.33% Date Thu Jan 5 11:37:56 GMT 2012 Rank 39 Aligned Residues 196 % Identity 12% Template c3e6eC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from e.faecalis2 complex with cycloserine Resolution 2.50 Å

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		83	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure							.																																												.	.	.	.
Query SS confidence							.																																												.	.	.	.
Query Sequence		G	Q	R	L	P	.	A	L	F	C	F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	.	.	.	.	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A
Query Conservation							.																																												.	.	.	.
Alig confidence							.																	.	.	.	.	.	.	.	.	.																			.	.	.	.															.
Template Conservation																								.	.	.	.	.	.	.	.	.																																					.
Template Sequence		G	W	H	R	P	T	R	L	H	I	D	T	Q	A	I	T	E	N	V	Q	K	E	.	.	.	.	.	.	.	.	.	C	Q	R	L	P	E	G	T	A	L	F	A	V	V	K	A	N	G	Y	G	H	G	A	V	E	S	A	K	A	A	K	K	G	G	A	T	.	G	F	C	V	A	L	L	D	E	A	I	E
Template Known Secondary structure			T	T	S	S																		.	.	.	.	.	.	.	.	.		T	T	S		T	T														T											T	T	T			.					S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.										.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		V	L	A	H	A	G	M	T	R	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	.	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S
Query Conservation																																																		.
Alig confidence									.										.											.	.	.	.	.																.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.										.											.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	E	A	G	V	Q	.	D	P	I	L	I	L	S	V	V	.	D	L	A	Y	V	P	L	L	I	Q	.	.	.	.	.	Y	D	L	S	V	T	V	A	T	Q	E	W	L	E	A	A	L	Q	Q	L	T	P	E	S	N	T	P	L	R	V	H	L	K	V	D	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T			.	S						S			.		G	G	G							.	.	.	.	.	T	T																T	T	S		T	T		S	S								B		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.										.											.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		G	G	E	K	S	K	F	G	L	A	A	T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	.	M	A	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L	H	K	L	G	V	N	I	Q	C	F	D
Query Conservation																																										.
Alig confidence																														.												.
Template Conservation																														.
Template Sequence		T	G	M	G	R	I	G	F	L	T	P	E	E	T	K	Q	A	V	R	F	V	Q	S	H	K	E	F	L	.	W	E	G	I	F	T	H	F	S	T	A	D	E	I	D	T	S	Y	F	E	K	Q	A	G	R	F	K	A	V	L	A	V	L	E	E	L	P	R	Y	V	H	V	S	N
Template Known Secondary structure		S	S	S		S	S	S	B															T		T	T			.									S	S	T	T	S	S																	T	T		S	S			S
Template Predicted Secondary structure																														.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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