Job Description P21170 Confidence 99.18% Date Thu Jan 5 11:37:56 GMT 2012 Rank 43 Aligned Residues 196 % Identity 12% Template c3cpgA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an unknown protein from bifidobacterium2 adolescentis Resolution 1.71 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																						.																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	.	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A	H	A	G	M	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																.														.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.														.
Template Sequence		I	T	D	G	V	H	R	V	L	D	R	I	A	A	A	E	E	Q	A	G	R	E	A	G	S	V	R	L	L	A	A	T	K	T	R	D	.	I	G	E	I	X	A	A	I	D	A	G	V	R	.	X	I	G	E	N	R	P	Q	E	V	T	A	K	A	E	G	L	A	R	R	C	A	E	R	G	F	S	L	G
Template Known Secondary structure																				T	T			T	T	S	S							T	T			.										T	T			.					S																			T	T
Template Predicted Secondary structure																																						.														.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
							165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	T	R	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G	G	E
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																						.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	A	A	E	H	I	P	F	H	L	I	G	Q	L	Q	S	N	K	I	G	K	V	L	P	V	.	.	.	.	.	V	D	T	I	E	S	V	D	S	I	D	L	A	E	K	I	S	R	R	A	V	A	R	G	I	T	V	G	V	L	L	E	V	.	.	.	.	.	.	.	.	.	.	.	N	E	S	G	E
Template Known Secondary structure														S				G	G	G					T	T	T	.	.	.	.	.		S																						T									B	.	.	.	.	.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																												.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.												.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.					.	.	.	.	.	.	310	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		K	S	K	F	G	L	A	A	T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	M	A	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L	H	K	L	G	V	N	.	.	.	.	I	Q	C	F	D	V	G	G
Query Conservation																																																																		.	.	.	.
Alig confidence																											.												.																											.	.	.	.
Template Conservation																											.												.
Template Sequence		E	S	K	S	G	C	D	P	A	H	A	I	R	I	A	Q	K	I	G	T	L	D	G	I	E	.	L	Q	G	L	X	T	I	G	A	H	V	.	H	D	E	T	V	I	R	R	G	F	S	H	L	R	K	T	R	D	L	I	L	A	S	G	E	P	G	T	D	R	C	R	E	L	S	X	G	X
Template Known Secondary structure		T	T	S	S	S	B		G	G	G										T		T	T			.											S	.	S																									T	T		T	T
Template Predicted Secondary structure																											.												.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions