Job Description P21170 Confidence 98.85% Date Thu Jan 5 11:37:56 GMT 2012 Rank 51 Aligned Residues 180 % Identity 14% Template c3co8B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from oenococcus oeni Resolution 1.70 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		R	L	P	A	L	F	C	F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	.	.	.	.	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A
Query Conservation																																																.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.											.	.	.	.															.
Template Conservation																												.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		R	S	T	R	I	E	F	S	K	S	S	L	A	Y	N	V	Q	Y	T	K	Q	V	S	G	A	K	.	.	.	.	.	.	.	.	.	.	T	L	W	L	A	V	K	S	N	A	Y	G	H	G	L	L	Q	V	S	K	I	A	R	E	C	G	V	D	.	G	L	A	V	S	V	L	D	E	G	I	A	I	R	Q
Template Known Secondary structure																											S	.	.	.	.	.	.	.	.	.	.												T	T									T	T	T	T	T			.					S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.											.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	G	M	T	R	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G	G	E	K
Query Conservation
Alig confidence						.										.											.	.	.	.	.																							.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation						.										.											.	.	.	.	.																							.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	I	D	.	D	F	I	L	I	L	G	P	I	.	D	V	K	Y	A	P	I	A	S	K	.	.	.	.	.	Y	H	F	L	T	T	V	S	S	L	D	W	L	K	S	A	D	K	I	L	G	K	.	.	.	.	E	K	L	S	V	N	L	A	V	D	T	G	X	N	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T			.	S						S			.		G	G	G							.	.	.	.	.	T	T																T	T		T	T	.	.	.	.									B		S	S	S		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.										.											.	.	.	.	.																							.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.		80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.
		241	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure							.																																.
Query SS confidence							.																																.
Query Sequence		S	K	F	G	L	.	A	A	T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	.	M	A	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L
Query Conservation							.																																.
Alig confidence		.					.																																.
Template Conservation		.
Template Sequence		.	R	I	G	V	R	S	K	K	D	L	K	D	E	I	E	F	L	Q	E	H	S	D	H	F	S	Y	D	G	I	F	T	H	F	A	S	S	D	N	P	D	D	H	Y	F	Q	R	Q	K	N	R	W	Y	E	L	I	D	G	L
Template Known Secondary structure		.	S	S	S	B		S														T	T	T	T											S	S	T	T		S																	T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions