Job Description P21170 Confidence 96.95% Date Thu Jan 5 11:37:56 GMT 2012 Rank 56 Aligned Residues 180 % Identity 14% Template c2vd9A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:alanine racemase; PDBTitle: the crystal structure of alanine racemase from bacillus2 anthracis (ba0252) with bound l-ala-p Resolution 2.1 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		L	F	C	F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	.	.	.	.	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A	H	A	G	M
Query Conservation																																												.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																	.	.	.	.									.						.
Template Conservation																		.	.	.	.	.	.	.	.	.	.																													.						.
Template Sequence		V	E	V	D	L	D	A	I	Y	N	N	V	T	H	I	E	.	.	.	.	.	.	.	.	.	.	F	I	P	S	D	V	E	I	F	A	V	V	K	G	N	A	Y	G	H	D	Y	V	P	V	A	I	A	L	.	E	A	G	A	T	.	R	L	A	V	A	F	L	D	E	A	L	V	L	R	R	A	G	I	T
Template Known Secondary structure																		.	.	.	.	.	.	.	.	.	.		S		T	T														T								T	T	.	T	T	T			.					S	S										T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																													.						.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.											.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G	G	E	K	S	K	F	G
Query Conservation
Alig confidence								.	.														.	.	.	.	.										.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.														.	.	.	.	.										.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	I	L	V	L	.	.	G	P	S	P	P	R	D	I	N	V	A	A	E	.	.	.	.	.	N	D	V	A	L	T	V	F	Q	.	.	.	.	E	W	V	D	E	A	I	L	W	D	G	S	S	T	M	Y	H	I	N	F	D	S	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	I	G
Template Known Secondary structure		S						.	.	S				G	G	G							.	.	.	.	.	T	T				B				.	.	.	.											S	S								B		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S
Template Predicted Secondary structure								.	.														.	.	.	.	.										.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.														.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	M	A	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L	H	K	L	G	V	N	I	Q	C	F
Query Conservation
Alig confidence											.	.										.
Template Conservation											.	.										.
Template Sequence		I	R	E	R	E	L	G	F	L	.	.	S	L	E	G	A	P	F	L	E	.	L	E	G	V	Y	T	H	F	A	T	A	D	E	V	E	T	S	Y	F	D	Q	Y	N	T	F	L	E	Q	L	S	W	L	E	F	G	V	D	P	F	V	H	T
Template Known Secondary structure		B									.	.		G	G	G		T	T			.									S	S	T	T	S	S	S		T	T	T																S
Template Predicted Secondary structure											.	.										.
Template SS confidence
		141	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions