Job Description P21170 Confidence 98.85% Date Thu Jan 5 11:37:56 GMT 2012 Rank 50 Aligned Residues 173 % Identity 12% Template c2rjgC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:alanine racemase; PDBTitle: crystal structure of biosynthetic alaine racemase from escherichia2 coli Resolution 2.40 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		P	A	L	F	C	F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	.	.	.	.	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A	H	A
Query Conservation																																														.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.											.	.	.	.													.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Sequence		A	T	V	V	I	N	R	R	A	L	R	H	N	L	Q	R	L	R	E	L	A	P	A	S	.	.	.	.	.	.	.	.	.	.	K	M	V	A	V	V	K	A	N	A	Y	G	H	G	L	L	E	T	A	R	T	L	P	D	A	D	.	.	.	A	F	G	V	A	R	L	E	E	A	L	R	L	R	A	G	G
Template Known Secondary structure																						S	T	T	S	.	.	.	.	.	.	.	.	.	.													T								T		T	T		S	.	.	.					S	S										T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.																											.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.											.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	T	R	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G	G	E	K	S	K
Query Conservation
Alig confidence					.																				.	.	.	.	.																								.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																				.	.	.	.	.																								.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	K	.	P	V	L	L	L	E	G	F	F	D	A	R	D	L	P	T	I	S	A	.	.	.	.	.	Q	H	F	H	T	A	V	H	N	E	E	Q	L	A	A	L	E	E	A	S	L	D	E	.	.	.	P	V	T	V	W	M	L	D	T	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R
Template Known Secondary structure				S	.					T	T			S		G	G	G							.	.	.	.	.	T	T							S													S	S	.	.	.		B							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure					.																				.	.	.	.	.																								.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.														.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		F	G	L	A	A	T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	.	M	A	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y
Query Conservation																																				.
Alig confidence																																				.
Template Conservation
Template Sequence		L	G	V	R	P	E	Q	A	E	A	F	Y	H	R	L	T	Q	C	K	N	V	R	Q	P	V	N	I	V	S	H	F	A	R	A	D	E	P	K	C	G	A	T	E	K	Q	L	A	I	F	N	T	F	C
Template Known Secondary structure		S	S															T		S	S	B		S	S		B						S	S	T	T		T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions