Job Description P21170 Confidence 99.18% Date Thu Jan 5 11:37:56 GMT 2012 Rank 42 Aligned Residues 176 % Identity 14% Template c2odoC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:alanine racemase; PDBTitle: crystal structure of pseudomonas fluorescens alanine racemase Resolution 2.80 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		R	L	P	A	L	F	C	F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	.	.	.	.	Q	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A
Query Conservation																																															.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.										.						.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.																							.						.
Template Sequence		R	P	A	R	A	L	I	D	L	Q	A	L	R	H	N	Y	Q	L	A	R	E	V	T	G	.	.	.	.	.	.	.	.	.	.	.	.	A	K	A	L	A	V	I	A	D	A	Y	G	H	G	A	V	R	C	A	Q	A	L	.	E	A	E	A	D	.	G	F	A	V	A	C	I	E	E	A	L	E	L	R	A
Template Known Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	S												T										.	G	G	G		S	.					S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.																							.						.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.													.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	G	M	T	R	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G	G	E	K
Query Conservation
Alig confidence							.																				.	.	.	.	.																								.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.																				.	.	.	.	.																								.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	I	R	A	.	P	I	L	L	L	E	G	F	F	E	A	D	E	L	P	L	I	V	E	.	.	.	.	.	H	D	F	W	C	V	V	H	S	L	W	Q	L	D	A	I	E	Q	A	R	L	A	K	.	.	.	P	I	H	V	W	L	L	D	S	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T			S	.					T	T			S	S	G	G	G							.	.	.	.	.	T	T							S										S			S	S	.	.	.									S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.																				.	.	.	.	.																								.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		S	K	F	G	L	A	A	T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	M	A	.	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L
Query Conservation																																								.
Alig confidence																										.														.
Template Conservation																										.
Template Sequence		H	R	V	G	L	H	P	N	D	Y	K	A	A	Y	Q	R	L	Q	A	S	A	N	V	A	.	K	I	V	L	M	S	H	F	A	R	A	D	E	L	D	C	T	R	S	V	E	Q	V	A	V	F	L	G	A	R	A	D	L
Template Known Secondary structure			S	S																T	S	S	S			.									S	S	T	T		S	S																T	T
Template Predicted Secondary structure																										.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions