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Job DescriptionP21170
Confidence100.00%DateThu Jan 5 11:37:56 GMT 2012
Rank14Aligned Residues384
% Identity19%Templatec2j66A_
PDB info PDB header:lyaseChain: A: PDB Molecule:btrk; PDBTitle: structural characterisation of btrk decarboxylase from2 butirosin biosynthesis
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80.........90.........100.........110.........120.........130.........140........
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Query Sequence  RVDLAQLVKTREAQGQRLPALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLGLE
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Template Sequence  QAEITALTKR. . . . . FETPFYLYDGDFIEAHYRQLRSRT. . . . . . . . . NPAIQFYLSLKANNNIHLAKLFRQWGL. . GVE
Template Known Secondary structure  .....S
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   5....10.... .....20.........30........ .40.........50.........60..... ...
 
   149150.........160.........170.........180.........190.........200.........210.........220........
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Query Sequence  AGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPRLGVRARLASQ
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Template Sequence  VASAGELALARHAGFSAENIIFSGPGKKRSELEIAV. . . QSGIYC. IIAESVEELFYIEELAEKENKTARVAIRINPD. .
Template Known Secondary structure  SSTT

GGG

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   6970.........80.........90.........100.... .....110 .........120.........130.........140..
 
   229230.........240.........250.........260.........270.........280.........290......... 300.......
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Query Sequence  GSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHK. LGVNIQCF
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Template Sequence  KSFTAIKMGGVPRQFGMDESMLDAVMDAVRSLQFTK. FIGIHVYTGTQNLNTDSIIESMKYTVDLGRNIYERYGIVCECI
Template Known Secondary structure  S




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   143......150.........160.........170........ .180.........190.........200.........210.........220.
 
   308.310.........320.........330.........340.........350.........360.........370.........380.......
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Query Sequence  DVGGGLGVDYEGTRSQSDCSVNYGLNEYANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTVP
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Template Sequence  NLGGGFGVPYFEKA. . . . . . . . LDIGKITRTVSDYVQEARDTRF. PQTTFIIESGRYLLAQAAVYVTEVLYRKASKGEVF
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   224.....230....... ..240.........250......... 260.........270.........280.........290....
 
   388.390.........400.........410.........420.........430.........440.........450.........460.......
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Query Sequence  TAPAEDAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGIFSLQERAWAEQLYLSMCHEVQKQLDPQN
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   468.470.........480.........490.........500.........510.........520.........530.........540.......
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Query Sequence  RAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTM
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Template Sequence  . . . . . . . . . . . . . . . . . VIVDGGMHHHAASPM. . . . . . . . . . . . . . EYIPLEKVTIAGPLCTPE. . . DCL. . . . . . GKDV
Template Known Secondary structure  .................S

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   297..300.........310. ........320......... 330.. ....
 
   548.550.........560.........570.... .....580.........590.........600.........610.
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Query Sequence  PMPEYDPENPPMLGFFMVGAYQEILGN. MHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQ
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Template Sequence  HVPALYPGD. . LVCVLNSGAYGLSFSPVHFLGHPTPIEILKR. . . NGSYEL. . IRRKGTADDIVA
Template Known Secondary structure  S


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   357..360..... ....370.........380.........390...... ...400.. .......410....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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