Job Description P21170 Confidence 99.58% Date Thu Jan 5 11:37:56 GMT 2012 Rank 32 Aligned Residues 188 % Identity 15% Template c2dy3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from corynebacterium glutamicum Resolution 2.10 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		R	L	P	A	L	F	C	F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	.	.	.	.	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A
Query Conservation																																																.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.											.	.	.	.															.
Template Conservation																												.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		N	L	L	T	T	K	I	D	L	D	A	I	A	H	N	T	R	V	L	K	Q	M	A	G	P	A	.	.	.	.	.	.	.	.	.	.	K	L	M	A	V	V	K	A	N	A	Y	N	H	G	V	E	K	V	A	P	V	I	A	A	H	G	A	D	.	A	F	G	V	A	T	L	A	E	A	M	Q	L	R	D
Template Known Secondary structure			S																						T	T	S	.	.	.	.	.	.	.	.	.	.												T	T											T	T	T			.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.											.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	G	M	T	R	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G	G	E	K
Query Conservation
Alig confidence															.	.											.	.	.	.	.														.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.											.	.	.	.	.														.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	I	S	Q	E	V	L	C	W	I	W	T	.	.	P	E	Q	D	F	R	A	A	I	D	.	.	.	.	.	R	N	I	D	L	A	V	I	S	P	A	H	A	.	.	.	K	A	L	I	E	T	D	A	E	H	I	R	V	S	I	K	I	D	S	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T			S									.	.	T	T	S							T	.	.	.	.	.	T	T							S					.	.	.					T				S								B			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.											.	.	.	.	.														.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	F	G	L	A	A	T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	M	A	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L	H	K	L	G	V	N	I	Q	C	F	D	V	G	G
Query Conservation
Alig confidence																										.												.	.	.	.
Template Conservation																										.												.	.	.	.
Template Sequence		H	R	S	G	V	D	E	Q	E	W	E	G	V	F	S	A	L	A	A	A	P	H	I	E	.	V	T	G	M	F	T	H	L	A	C	A	.	.	.	.	P	E	T	D	R	Q	I	I	A	F	R	R	A	L	A	L	A	R	K	H	G	L	E	C	P	V	N	H	V	C	N
Template Known Secondary structure			S	S	S	B																T	T			.												.	.	.	.																				T	T							B
Template Predicted Secondary structure																										.												.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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