Job Description P21170 Confidence 99.44% Date Thu Jan 5 11:37:56 GMT 2012 Rank 34 Aligned Residues 200 % Identity 16% Template c1vftA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:alanine racemase; PDBTitle: crystal structure of l-cycloserine-bound form of alanine2 racemase from d-cycloserine-producing streptomyces3 lavendulae Resolution 2.30 Å

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		86	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.																																												.	.	.	.
Query SS confidence					.	.	.																																												.	.	.	.
Query Sequence		L	P	A	.	.	.	L	F	C	F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	H	.	.	.	.	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V
Query Conservation					.	.	.																																												.	.	.	.
Alig confidence					.	.	.																							.	.	.	.	.	.	.	.	.	.												.	.	.	.														.
Template Conservation																														.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		T	P	T	R	V	Y	A	E	I	D	L	D	A	V	R	A	N	V	R	A	L	R	A	R	A	P	R	S	.	.	.	.	.	.	.	.	.	.	A	L	M	A	V	V	K	S	N	A	Y	G	H	G	A	V	P	C	A	R	A	A	Q	E	A	G	A	A	.	W	L	G	T	A	T	P	E	E	A	L	E	L
Template Known Secondary structure				S	S																			T	T	S	T	T	S	.	.	.	.	.	.	.	.	.	.													T													T		S	.					S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.											.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	H	A	G	M	T	R	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G	G
Query Conservation
Alig confidence								.	.																				.	.	.	.	.																														.	.	.							.	.	.	.	.	.	.	.
Template Conservation								.	.																				.	.	.	.	.																														.	.	.							.	.	.	.	.	.	.	.
Template Sequence		R	A	A	G	I	Q	.	.	G	R	I	M	C	W	L	W	T	P	G	G	P	W	R	E	A	I	E	.	.	.	.	.	T	D	I	D	V	S	V	S	G	M	W	A	L	D	E	V	R	A	A	A	R	A	A	G	R	T	A	R	I	.	.	.	Q	L	A	D	T	G	.	.	.	.	.	.	.	.	L	G
Template Known Secondary structure				T	T			.	.	S									T	T									.	.	.	.	.	T	T							S														T	T	S					.	.	.					S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.																				.	.	.	.	.																														.	.	.							.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.									.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		E	K	S	K	F	G	L	A	A	T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	M	A	.	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L	H	K	L	G	V	N	I	Q	C	F	D	V	G	G	G	L	G	V
Query Conservation																																										.
Alig confidence																												.														.
Template Conservation																												.
Template Sequence		R	N	G	C	Q	P	A	D	W	A	E	L	V	G	A	A	V	A	A	Q	A	E	G	T	V	Q	.	V	T	G	V	W	S	H	F	A	C	A	D	E	P	G	H	P	S	I	R	L	Q	L	D	A	F	R	D	M	L	A	Y	A	E	K	E	G	V	D	P	E	V	R	H	I	A	N	S	P	A	T
Template Known Secondary structure		S	S	S			G	G	G														T	T	S			.									S	S	T	T	S	T	T																					T	T				S
Template Predicted Secondary structure																												.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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