Job Description P21170 Confidence 98.87% Date Thu Jan 5 11:37:56 GMT 2012 Rank 49 Aligned Residues 182 % Identity 12% Template c1niuA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:alanine racemase; PDBTitle: alanine racemase with bound inhibitor derived from l-2 cycloserine Resolution 2.20 Å

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		83	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure										.																																									.	.	.	.
Query SS confidence										.																																									.	.	.	.
Query Sequence		G	Q	R	L	P	A	L	F	.	C	F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	.	.	.	.	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A
Query Conservation										.																																									.	.	.	.
Alig confidence										.																					.	.	.	.	.	.	.	.	.												.	.	.	.															.
Template Conservation																															.	.	.	.	.	.	.	.	.																														.
Template Sequence		D	F	H	R	D	T	W	A	E	V	D	L	D	A	I	Y	D	N	V	E	N	L	R	R	L	L	P	D	D	.	.	.	.	.	.	.	.	.	T	H	I	M	A	V	V	K	A	N	A	Y	G	H	G	D	V	Q	V	A	R	T	A	L	E	A	G	A	S	.	R	L	A	V	A	F	L	D	E	A	L	A
Template Known Secondary structure					S	S																					S		T	T	.	.	.	.	.	.	.	.	.	S													T													T			.					S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.										.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	H	A	G	M	T	R	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G
Query Conservation
Alig confidence																		.	.											.	.	.	.	.																											.	.	.	.											.	.	.	.	.	.	.
Template Conservation																		.	.											.	.	.	.	.																											.	.	.	.											.	.	.	.	.	.	.
Template Sequence		L	R	E	K	G	I	E	A	P	I	L	V	L	G	A	S	.	.	R	P	A	D	A	A	L	A	A	Q	.	.	.	.	.	Q	R	I	A	L	T	V	F	R	S	D	W	L	E	E	A	S	A	L	Y	S	G	P	F	P	I	.	.	.	.	H	F	H	L	M	D	T	G	M	G	.	.	.	.	.	.	.
Template Known Secondary structure					T	T			S						S			.	.		G	G	G							.	.	.	.	.	T	T																T	T				S	S			.	.	.	.							S	S			.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.											.	.	.	.	.																											.	.	.	.											.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure														.																												.
Query SS confidence														.																												.
Query Sequence		G	E	K	S	K	F	G	L	A	A	T	Q	.	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	.	M	A	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L
Query Conservation														.																												.
Alig confidence		.	.	.	.									.																.												.
Template Conservation		.	.	.	.																									.
Template Sequence		.	.	.	.	R	L	G	V	K	D	E	E	E	T	K	R	I	V	A	L	I	E	R	H	P	H	F	V	.	L	E	G	L	Y	T	H	F	A	T	A	D	E	V	N	T	D	Y	F	S	Y	Q	Y	T	R	F	L	H	M	L	E	W	L
Template Known Secondary structure		.	.	.	.	S	S	S			S														S	T	T			.									S	S	T	T	S	S																	T	T	S
Template Predicted Secondary structure		.	.	.	.																									.
Template SS confidence
						136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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