Job Description P0AFK6 Confidence 1.93% Date Thu Jan 5 11:26:36 GMT 2012 Rank 29 Aligned Residues 85 % Identity 15% Template c3qnqD_ PDB info PDB header:membrane protein, transport protein Chain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system Resolution 3.29 Å

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		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		L	P	L	A	M	P	A	V	A	A	G	W	V	L	S	F	T	L	S	M	D	D	V	V	V	S	S	F	V	T	G	P	S	Y	E	I	L	P	L	K	I	Y	S	M	V	K	V	G	V	S	P	E	V	N	A	L	A	T	I	L	L	V	L	S	L	V	M	V	I	.	A	S	Q	L	I	A	R	D	K	T
Query Conservation																																																																							.
Alig confidence																																				.	.																																		.
Template Conservation																																				.	.
Template Sequence		I	P	F	I	V	V	P	V	V	L	T	I	V	S	Y	F	A	M	E	W	G	L	V	A	R	P	S	G	A	A	V	T	W	T	.	.	T	P	I	L	F	S	G	Y	L	G	S	G	G	K	I	S	G	V	I	L	Q	L	V	N	F	A	L	A	F	V	I	Y	L	P	F	L	K	I	W	D	K	Q	K	I
Template Known Secondary structure																					T	T	S	S					S					T	T	.	.	S									T	T	T	T		T	T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.			.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	N	T	G	D	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	E	K	G	E	A	A
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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