 |
Job Description | P76512 | Confidence | 3.19% | Date | Thu Jan 5 12:23:52 GMT 2012 |
Rank | 75 | Aligned Residues | 76 |
% Identity | 11% | Template | c2q8fA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 1; |
PDBTitle: structure of pyruvate dehydrogenase kinase isoform 1
|
Resolution | 2.03 Å |
|
 |
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
|
|
|
|
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
D | G | G | V | F | E | T | K | I | G | A | V | L | S | E | V | A | S | G | V | M | N | T | K | . |
. |
T | K | G | K | V | S | L | N | L | E | I | E | P | F | D | E | N | . |
R | L | K | I | K | H | K | L | S | Y | V | R | P | T | N | R | G | K | I | S | E | E | D | . |
. |
. |
. |
. |
. |
. |
T | T | E | T | P | M |
Query Conservation |   |
  |   |
|   |
|   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|   |   |
|
| . | . |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   | . |
|
|   |
|   |
|
|
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|
| . | . | . | . | . | . | . |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |
|
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | P | S | H | L | Y | H | M | V | F | E | L | F | K | N | A | M | R | A | T | M | E | H | H | A | N | R | G | V | Y | P | P | I | Q | V | H | V | T | L | G | N | E | D | L | T | V | K | M | S | D | R | G | G | G | V | P | L | R | K | I | D | R | L | F | N | Y | M | Y | S | T | A | P | R | P | R | V | E | T | S | R |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | T | T |
|
|
|
|  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |
| S |
|
|
|
|  |  |  |  | G | G | G | G |
| T | T | T | T |
|
|
|
|
|
| S | S |
|
| S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
269 | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . |
  |
  |   |
87 | . | . | 90 | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
Y | V | N | R | G | G |
Query Conservation |   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
Template Sequence |   |
A | V | P | L | A | G |
Template Known Secondary structure |   |
|
|
| S | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
349 | 350 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|