Job Description P76512 Confidence 4.03% Date Thu Jan 5 12:23:52 GMT 2012 Rank 65 Aligned Residues 56 % Identity 14% Template c1v06A_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:hmg box-containing protein 1; PDBTitle: axh domain of the transcription factor hbp1 from m.musculus Resolution UNK

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	T	K	G	K	V	S	L	N	L	E	I	E	P	F	D	E	N	R	L	K	I	K	H	K	L	S	Y	V	R	P	T	N	R	G	K	I	S	E	E	D	T	T	E	T	P	M	Y	V	N	R	G	G	R	L	T	I	L	Q	E	D	Q	G	Q	L	L	T	L	A	G	E	P
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	G	E	S	V	L	K	L	T	F	D	P	G	T	V	E	D	G	L	L	T	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	K	L	D	H	P	F	Y	V	K	N	K	G	W	S	S	F	Y	P	S	L	T	V	V	Q	H	G	I	P	C	C	E
Template Known Secondary structure			T	T											S	S	G	G	G							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T						T	T	T					S	S									S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.																		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions