 |
| Job Description | P27434 | | Confidence | 25.47% | Date | Thu Jan 5 11:44:01 GMT 2012 |
| Rank | 147 | Aligned Residues | 30 |
| % Identity | 17% | Template | d2ns0a1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| RHA1 ro06458-like
|
| Resolution | 2.00 |
|
| | |
301 | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . |
| Predicted Secondary structure | |
|
|
|  | | | |  |
|
| | | | |
|
|
|
|
|
|
|
|
| | | | | | |
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
P | A | A | V | Q | I | Q | Y | Q | G | K | P | V | D | L | S | R | F | I | R | T | N | Q | V | A | R | L | T | L | N | A | E | Q |
| Query Conservation | |
| | |
| |
| | |
|
| | |
| |
| | | | | | | | |
| |
| | |
| | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| |
| |
| |
|
|
|
|
|
|
|
| | | |
|
| . | . | . | | |
|
|
|
|
|
| | |
| Template Sequence | |
A | G | E | V | E | V | T | Q | K | G | A | V | V | D | P | R | S | A | R | G | . |
. |
. |
P | I | R | I | R | W | T | R | T | D |
| Template Known Secondary structure | |
T | T | S | | | | | | T | T | | |
|
| T | T | T |
|
| S | . | . | . |
|
| | | | |
|
|
|
|
| Template Predicted Secondary structure | |
|
|
| | | | | |
|
| | |
|
|  | | |
|
|
| . | . | . |
| | | | |
|
|
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
|
. | . | . | . | 80 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
