Return to main results Retrieve Phyre Job Id

Job DescriptionP27434
Confidence29.49%DateThu Jan 5 11:44:01 GMT 2012
Rank133Aligned Residues33
% Identity12%Templated1z05a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ROK associated domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.......
Predicted Secondary structure 






Query SS confidence 
































Query Sequence  TGARLRNAREQLGLSQQAVAERLCLKVSTVRDI
Query Conservation 

  

 


  



 


  
 
    
 

Alig confidence 
































Template Conservation     

  
      

 


   


  


  
Template Sequence  AGRVYKLIDQKGPISRIDLSKESELAPASITKI
Template Known Secondary structure 
SB
T

Template Predicted Secondary structure 







Template SS confidence 
































   17..20.........30.........40.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions