Job Description P27434 Confidence 90.71% Date Thu Jan 5 11:44:01 GMT 2012 Rank 58 Aligned Residues 81 % Identity 14% Template d1lm8v_ SCOP info Prealbumin-like VHL VHL Resolution 1.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.								.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.																												.
Query SS confidence																	.	.	.	.	.	.	.																												.
Query Sequence		P	V	A	D	P	N	A	L	V	M	N	F	T	A	D	.	.	.	.	.	.	.	C	W	L	E	V	T	D	A	T	G	K	K	L	F	S	G	M	Q	R	K	D	G	N	L	N	L	T	.	G	Q	A	P	Y	K	L	K	I	G	A	P	A	A	V	Q	I	Q	Y	Q	G	K	P	V	D	L	S	R	F	I
Query Conservation																	.	.	.	.	.	.	.																												.
Alig confidence																	.	.	.	.	.	.	.				.	.	.																						.
Template Conservation																											.	.	.
Template Sequence		S	V	N	S	R	E	P	S	Q	V	I	F	C	N	R	S	P	R	V	V	L	P	V	W	L	.	.	.	N	F	D	G	E	P	Q	P	Y	P	T	L	P	P	G	T	G	R	R	I	H	S	Y	R	G	H	L	W	L	F	R	D	A	G	T	H	D	G	L	L	V	N	Q	T	E	L	F	V	P	S	L	N
Template Known Secondary structure																	S	S	S								.	.	.		T	T	S								B		T	T									T	T								T	T	T			B				T	T	B	S		B
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		320	.	.	.	.			.	.	.	.	.	330	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		R	T	N	Q	V	.	.	A	R	L	T	L	N	A
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		V	D	G	Q	P	I	F	A	N	I	T	L	P	V
Template Known Secondary structure		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions