Job Description P27434 Confidence 38.17% Date Thu Jan 5 11:44:01 GMT 2012 Rank 112 Aligned Residues 55 % Identity 20% Template c3l1pA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:pou domain, class 5, transcription factor 1; PDBTitle: pou protein:dna complex Resolution 2.80 Å

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		15	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure						.	.	.																					.	.	.	.	.	.
Query SS confidence						.	.	.																					.	.	.	.	.	.
Query Sequence		T	G	A	R	.	.	.	L	R	N	A	R	E	Q	L	G	L	S	Q	Q	A	V	A	E	R	L	C	.	.	.	.	.	.	L	K	V	S	T	V	R	D	I	E	E	D	K	A	P	A	D	L	A	S	T	F	L	R	G	Y	I	R	S	Y	A	R
Query Conservation						.	.	.																					.	.	.	.	.	.
Alig confidence						.	.	.																					.	.	.	.	.	.																		.
Template Conservation																																																				.
Template Sequence		L	E	Q	F	A	K	L	L	K	Q	K	R	I	T	L	G	Y	T	Q	A	D	V	G	L	T	L	G	V	L	F	G	K	V	F	S	Q	T	T	I	S	R	F	E	A	L	Q	L	S	L	K	.	N	M	S	K	L	R	P	L	L	E	K	W	V	E
Template Known Secondary structure																T	T															S													T	T		S				.
Template Predicted Secondary structure																																																				.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions