Job Description P27434 Confidence 99.79% Date Thu Jan 5 11:44:01 GMT 2012 Rank 1 Aligned Residues 80 % Identity 26% Template c3fymA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: the 1a structure of ymfm, a putative dna-binding membrane2 protein from staphylococcus aureus Resolution 1.00 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	G	A	R	L	R	N	A	R	E	Q	L	G	L	S	Q	Q	A	V	A	E	R	L	C	L	K	V	S	T	V	R	D	I	E	E	D	K	A	P	A	D	L	A	S	T	F	L	R	G	Y	I	R	S	Y	A	R	L	V	H	I	P	E	E	E	L	L	P	G	L	E	K	Q	A	P	L	R	A	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	G	E	A	L	K	G	R	R	E	R	L	G	M	T	L	T	E	L	E	Q	R	T	G	I	K	R	E	M	L	V	H	I	E	N	N	E	F	D	Q	L	P	N	K	N	Y	S	E	G	F	I	R	K	Y	A	S	V	V	N	I	E	P	N	Q	L	I	Q	A	H	Q	D	E	I	P	S	N	Q	A	E
Template Known Secondary structure														T	T																						T	T		G	G	G	S	S	S	G	G	G												T	T										T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		1003	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions