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Job Description | P27434 | Confidence | 51.37% | Date | Thu Jan 5 11:44:01 GMT 2012 |
Rank | 87 | Aligned Residues | 43 |
% Identity | 12% | Template | c1l9uH_ |
PDB info |
PDB header:transcription | Chain: H: PDB Molecule:sigma factor siga; |
PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution
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Resolution | 4.00 Å |
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26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | G | L | S | Q | Q | A | V | A | E | R | L | C | L | K | V | S | T | V | R | D | I | E | E | D | K | A | P | A | D | L | A | S | T | F | L | R | G | Y | I | R | S | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | E | H | T | L | E | E | V | G | A | Y | F | G | V | T | R | E | R | I | R | Q | I | E | N | K | A | L | R | K | L | K | Y | H | E | S | R | T | R | K | L | R | D | F |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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394 | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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