|   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | D | I | L | L | Y | E | Y | L | E | P | L | D | L | K | I | N | E | L | A | E | L | L | H | V | H | R | . |
. |
. |
. |
N | S | V | S | A | L | I | N | N | N | R | K | L | T | T | E | M | A | F | R | L | A | K | V | F | D | T | T | V | D | F | W | L | N | L | Q | A | A | V | D | L | W | E | V | E | N | N | M |
Query Conservation |   |
|
|
|   |
|   |   |
|   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|
|
|   | . | . | . | . |   |   |
|
|   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
| . |
|   |   |
|   |   |   |
|
|
|
|   |
|
|
|   |   |
|
|
|   |   |   |   |
|   |
|   |
|
|   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
L | I | R | R | L | . |
K | D | A | R | L | R | A | G | I | S | Q | E | K | L | G | V | L | A | G | I | D | E | A | S | A | S | A | R | M | N | Q | Y | E | K | G | K | H | A | P | D | F | E | M | A | N | R | L | A | K | V | L | K | I | P | V | S | Y | L | Y | T | P | E | D | D | L | A | Q | I | I | L | T | W | N | E |
Template Known Secondary structure |   |
|  |  |  |  | . |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  | T | T | S |
| G | G | G | G | G |
|
|
|  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | |
. | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | T | Q | E | E | L | G | R | I | E | T | V | A | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|
Template Sequence |   |
L | N | E | Q | E | R | K | R | I | N | F | Y | I | R |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |