 |
Job Description | P0A9T6 | Confidence | 72.87% | Date | Thu Jan 5 11:11:19 GMT 2012 |
Rank | 277 | Aligned Residues | 52 |
% Identity | 12% | Template | c3hefB_ |
PDB info |
PDB header:viral protein | Chain: B: PDB Molecule:gene 1 protein; |
PDBTitle: crystal structure of the bacteriophage sf6 terminase small2 subunit
|
Resolution | 1.65 Å |
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | I | L | L | Y | E | Y | L | E | P | L | D | L | K | I | N | E | L | A | E | L | L | H | V | . |
H | R | N | S | V | S | A | L | I | N | N | N | R | K | L | T | T | E | M | A | F | R | L | A | K | V | F | D | T | T | V | D | F | W |
Query Conservation |   |
|   |
|   |   |
|   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|
| . |
|   |   |   |
|
|   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   | . | . |   |
|
|   |
|   |
|
|   |   |
|
|   |   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |   | . | . | . | . |   |   |
|   |
|   |   |   |   |
|
|   |   |   |   |
|   |   |
Template Sequence |   |
D | D | I | C | S | . |
. |
L | L | S | S | G | E | S | L | L | K | V | C | K | R | P | G | M | P | D | K | S | T | V | F | R | W | L | A | K | H | . |
. |
. |
. |
E | D | F | R | D | K | Y | A | K | A | T | E | A | R | A | D | S | I |
Template Known Secondary structure |   |
 |  |  |  |  | . | . |  |  |  | T | T |
|
|  |  |  |  | T | T | S | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  | . | . |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | |
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|