Job Description P77541 Confidence 57.61% Date Thu Jan 5 12:30:23 GMT 2012 Rank 456 Aligned Residues 156 % Identity 12% Template d5ruba1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.70

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		68	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure											.	.	.														.
Query SS confidence											.	.	.														.
Query Sequence		L	T	D	I	R	R	I	T	D	.	.	.	V	C	S	L	P	L	L	V	D	A	D	I	G	.	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A
Query Conservation											.	.	.														.
Alig confidence											.	.	.														.																				.	.									.	.	.	.	.	.	.
Template Conservation																																															.	.									.	.	.	.	.	.	.
Template Sequence		I	S	A	L	W	K	V	L	G	R	P	E	V	D	G	G	L	V	V	G	T	I	I	K	P	K	L	G	L	R	P	K	P	F	A	E	A	C	H	A	F	W	L	G	G	.	.	D	F	I	K	N	D	E	P	.	.	.	.	.	.	.	Q	G	N	Q	P	F	A	P	L	R	D	T	I	A	L	V	A	D
Template Known Secondary structure										T			S	S	S										S	S	S	S															T	T	T		.	.	S						T	T	.	.	.	.	.	.	.		S		B	T	T	B
Template Predicted Secondary structure																																															.	.									.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		144	.	.	.	.	.						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.
Predicted Secondary structure								.	.	.	.	.																																			.	.	.	.	.										.											.
Query SS confidence								.	.	.	.	.																																			.	.	.	.	.										.											.
Query Sequence		A	V	D	A	K	T	.	.	.	.	.	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	.	.	.	.	.	M	L	F	P	E	A	I	T	E	.	L	A	M	Y	R	Q	F	A	D	A	.	V	Q	V	P	I	L	A	N	I
Query Conservation								.	.	.	.	.																																			.	.	.	.	.										.											.
Alig confidence								.	.	.	.	.												.	.	.	.	.																			.	.	.	.	.										.											.
Template Conservation																								.	.	.	.	.
Template Sequence		A	M	R	R	A	Q	D	E	T	G	E	A	K	L	F	S	A	N	I	T	A	D	.	.	.	.	.	D	P	F	E	I	I	A	R	G	E	Y	V	L	E	T	F	G	E	N	A	S	H	V	A	L	L	V	D	G	Y	V	A	G	A	A	A	I	T	T	A	R	R	R	F	P	D	N	F	L	H	Y	H	R
Template Known Secondary structure											S	S											S	.	.	.	.	.	S																G	G	G	G	G	G							T	T	T	S													T	T	S
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.						.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		212	.											.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	.	.	.	.	.	.	.	.	.	.	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L
Query Conservation				.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	H	G	A	V	T	S	P	Q	S	K	R	G	Y	T	A	F	V	H	C	K	M	A	R	L	Q	G	A	S	G	I	H	T	G	T
Template Known Secondary structure		T	T	T					S	T	T			S	S														T		S
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions