Job Description P77541 Confidence 59.57% Date Thu Jan 5 12:30:23 GMT 2012 Rank 452 Aligned Residues 162 % Identity 16% Template d3bofa2 SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 1.70

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.													.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D	A	D	I	G	F	G	S	S	.	.	.	.	.	.	.	.	.	.	.	.	A	F	N	V	A	R	T	V	K	S
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	G	S	D	V	I	L	T	N	T	F	G	A	T	R	M	K	L	R	K	H	G	L	E	D	K	L	D	P	I	V	R	N	A	V	R	I	A	R	R	A	A	G	E	K	L	V	F	G	D	I	G	P	T	G	E	L	P	Y	P	L	G	S	T	L	F	E	E	F	Y	E	N	F	R	E	T	V	E	I
Template Known Secondary structure		T	T	T		S					S		T	T		S					G	G	G	T		G	G	G																	T	T	S										S			B	T	T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	.	.	.	.	A	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E
Query Conservation																																																											.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.												.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Template Sequence		M	V	E	E	G	V	D	G	I	I	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	S	D	I	L	E	L	K	A	A	V	L	A	A	R	E	V	S	R	D	V	F	L	I	A	H	M	T	F	D	E	K	G	R	S	L	T	G	T	D	P	A	N	F	A	.	.	.	I	T	F	D	E
Template Known Secondary structure					T	T		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				S	S	S										T	T	S			T	T									.	.	.					T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.															.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		A	G	A	E	M	L	F	P	E	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	.	.	.	.	Q	V	P	I	L	A	N	I	T	E	F
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.
Template Conservation
Template Sequence		L	D	I	D	A	L	G	I	N	C	S	L	G	P	E	E	I	L	P	I	F	Q	E	L	S	Q	Y	T	D	K	F	L	V	V	E	P	N	A	G
Template Known Secondary structure		S	S		S						S	S	S															T			S								S	S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions