Job Description P77541 Confidence 87.76% Date Thu Jan 5 12:30:23 GMT 2012 Rank 356 Aligned Residues 162 % Identity 17% Template d1w0ma_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.5

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	.	D	A	D	I	G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K
Query Conservation																	.
Alig confidence																	.									.																						.	.	.	.	.	.	.	.	.								.	.														.	.
Template Conservation																										.																						.	.	.	.	.	.	.	.	.								.	.														.	.
Template Sequence		E	L	G	L	V	S	Q	S	V	D	I	P	V	Y	A	Q	G	A	D	V	E	A	G	G	.	A	H	T	A	H	V	S	L	E	N	I	K	E	A	G	G	S	G	V	I	L	.	.	.	.	.	.	.	.	.	N	H	S	E	A	P	L	.	.	K	L	N	D	L	A	R	L	V	A	K	A	K	.	.	S
Template Known Secondary structure		G						T	T		S	S		B			S			S	B	S	S		S	.	S		T	T			B								T							.	.	.	.	.	.	.	.	.			T	T	S			.	.														.	.
Template Predicted Secondary structure																										.																						.	.	.	.	.	.	.	.	.								.	.														.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.										.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.			.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.												.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	I	T	E	.	.	.	.	.	.	.	.	.	.	.	L	A	M	Y	R	Q	F	A	D	A	V	Q	.	.	V	P	I	L	A	N	I	T	E	F	G
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	L	D	V	V	V	C	A	P	D	.	.	.	.	.	.	.	.	.	.	.	P	R	T	S	L	A	A	A	A	L	G	P	H	A	V	A	V	E	P	P	E	L	I	G	T	G	R	A	V	S	R	Y	K	P	E	A	I	V	E	T	V	G	L	V	S	R	H	F	P	E	V	S	V	I	T	G	A	G
Template Known Secondary structure		T	T								S	S	.	.	.	.	.	.	.	.	.	.	.										T			S							G	G	G	T	T	T	S																							T	T	S						S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.												.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	R	A	M	.	.	N	R	A	A	E	H	V	Y	N	V	L	R	Q
Query Conservation																														.	.
Alig confidence																														.	.
Template Conservation
Template Sequence		I	E	S	G	D	D	V	A	A	A	L	R	L	G	T	R	G	V	L	L	A	S	A	A	V	K	A	K	D	P	Y	A	K	I	V	E	L	A	K	P	L	S	E
Template Known Secondary structure				S										T	T		S										T		S	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions