Job Description P77541 Confidence 97.33% Date Thu Jan 5 12:30:23 GMT 2012 Rank 97 Aligned Residues 209 % Identity 15% Template d1vyra_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 0.9

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																																						.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	N	H	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	.	.	.	S	L	P	L	L	V	D	A	D	I	G	F	G	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.												.		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.
Template Sequence		P	L	M	G	E	Y	Y	R	Q	R	A	S	A	G	L	I	I	S	E	A	T	Q	I	S	A	Q	A	K	G	Y	A	G	A	P	G	L	H	S	P	E	Q	I	A	A	W	K	K	I	T	A	G	V	H	A	E	D	G	R	I	A	V	Q	L	W	H	T	.	G	R	I	S	H	S	S	I	Q	P	G	G	Q
Template Known Secondary structure											T	T	T	S	S									S	S	S	T	T			S	T	T			B	S	S	S																	T	T											.	T	T	S	S		G	G	G	S	G	G	G
Template Predicted Secondary structure																																																																				.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.
																																										92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.												.	.	120
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	.	.	.	.	.	.	.	.	.	.	.	V	G	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	V	S	A	S	A	L	N	A	N	T	R	T	S	L	R	D	E	N	G	N	A	I	R	V	D	T	T	T	P	R	A	L	E	L	D	E	I	P	G	I	V	N	D	F	R	Q	A	V	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N
Template Known Secondary structure						S	S	S					S							T	T	S															G	G	G																		T	T		S								T	T	S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.									.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.																													.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.																													.	.	.
Query Sequence		K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	.	.	.	.	.	.	.	.	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.																													.	.	.
Alig confidence											.																								.								.	.	.	.	.	.	.	.																													.	.	.
Template Conservation											.																								.
Template Sequence		Q	R	T	D	Q	Y	G	G	S	.	V	E	N	R	A	R	L	V	L	E	V	V	D	A	V	C	N	E	W	S	A	D	R	.	I	G	I	R	V	S	P	I	G	T	F	Q	N	V	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	E	L	A	K	R	G	I	A	Y	L	H	M	S	E	T	D	L
Template Known Secondary structure					S	T	T	S	S	S	.					T														S		G	G	G	.								S	S		B	T	T	B				T	T															T	T		S								B	T
Template Predicted Secondary structure											.																								.
Template SS confidence
		198	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
						190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	R
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																						.	.	.
Template Conservation																											.	.	.
Template Sequence		A	G	G	K	P	Y	S	E	A	F	R	Q	K	V	R	E	R	F	H	G	V	I	I	G	A	.	.	.	G	A	Y	T	A	E	K	A	E	D	L	I	G	K	G	L	I	D	A	V	A	F	G	R	D	Y	I	A
Template Known Secondary structure		T	B																		S						.	.	.	S	S												T	T	S		S					S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300				.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions