Job Description P77541 Confidence 97.18% Date Thu Jan 5 12:30:23 GMT 2012 Rank 107 Aligned Residues 209 % Identity 18% Template d1ujpa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.34

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.													60	.	.	.	.
Predicted Secondary structure																.	.	.	.													.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.													.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	G	K	A	F	R	A	A	L	T	K	E	N	.	.	.	.	P	L	Q	I	V	G	T	I	N	A	N	H	.	.	.	.	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	.	.	.	.	.	.	.	.	.	.	.	.	G	I	S	T	L
Query Conservation																.	.	.	.													.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.													.	.	.	.							.								.						.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.								.						.	.	.	.	.	.	.
Template Sequence		T	T	L	E	A	F	A	K	A	R	S	E	G	R	A	A	L	I	P	Y	L	T	A	G	F	P	S	R	E	G	F	L	Q	A	V	E	E	V	L	P	.	Y	A	D	L	L	E	I	.	G	L	P	Y	S	.	.	.	.	.	.	.	D	G	P	V	I	Q	R	A	S	E	L	A	L	R	K	G	M	S	V
Template Known Secondary structure													T	T	B									T	T	S	S													G	G	.	G		S	S				.						.	.	.	.	.	.	.															T	T
Template Predicted Secondary structure																																										.								.						.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.		.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D	A	D	I	G	F	G	S	S	A	.	.	.	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I
Query Conservation																																.	.	.
Alig confidence																						.	.	.					.			.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.					.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	G	A	L	E	L	V	R	E	V	R	A	L	T	E	K	P	L	F	L	.	.	.	M	T	Y	L	.	N	P	V	L	A	W	G	P	E	R	F	F	G	L	F	K	Q	A	G	A	T	G	V	I	L	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	P	D	E	D	P	G	L	V
Template Known Secondary structure																	S					.	.	.					.																			T							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G
Template Predicted Secondary structure																						.	.	.					.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																.	.	130	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template Sequence		R	L	A	Q	E	I	G	L	E	T	V	F	L	L	A	P	T	S	T	.	.	.	.	.	.	.	.	.	.	D	A	R	I	A	T	V	V	R	H	A	T	G	F	V	Y	A	V	S	V	E	V	K	D	L	V	R	R	I	K	A	R	T	A	L	P	V	A	V	G	.	.	.	F	G	V	S	G	K	A	T
Template Known Secondary structure								T									T	T			.	.	.	.	.	.	.	.	.	.									T	T			S																		T	T			S						.	.	.	S				S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.											.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	R	A	M	N	R	A	.	.	A	E	H	V	Y	N	V	L	R	Q
Query Conservation																											.	.
Alig confidence						.	.																				.	.
Template Conservation						.	.
Template Sequence		A	A	Q	A	.	.	A	V	A	D	G	V	V	V	G	S	A	L	V	R	A	L	E	E	G	R	S	L	A	P	L	L	Q	E	I	R	Q
Template Known Secondary structure						.	.	T	T	S	S														T	T
Template Predicted Secondary structure						.	.
Template SS confidence
		217	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions