Return to main results Retrieve Phyre Job Id

Job DescriptionP77541
Confidence100.00%DateThu Jan 5 12:30:23 GMT 2012
Rank10Aligned Residues252
% Identity30%Templated1s2wa_
SCOP infoTIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Phosphoenolpyruvate mutase/Isocitrate lyase-like
Resolution1.69

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  SPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLV
Query Conservation    
  

 
         
   
  



 
 


 

  

   

  

 

   

  

      
      



Alig confidence 















































.

.........



















Template Conservation   
   

 
      
  
   
  

   
  

 

  

   
 
. 
......... 
       
      



Template Sequence  KKTTQLKQMLNSKDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSAQ. LW. . . . . . . . . TQVVEVLEFMSDASDVPILL
Template Known Secondary structure 
SSS

ST
S


T.

.........T
SS
Template Predicted Secondary structure 













..........





Template SS confidence 















































































   6...10.........20.........30.........40.........50... .. ....60.........70.....
 
   85....90.........100.........110.........120.........130.........140.........150.........160.. .
Predicted Secondary structure 


































.
Query SS confidence 













































































.
Query Sequence  DADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDAL. A
Query Conservation 
 
 


     
  

     


 

 



   
 

      

  
    

 

  
    
  
 




 . 
Alig confidence 






.




























......


































.
Template Conservation 
 
 


.    
  

     





 



   
......
  
   
    

 

  
    
  
 




   
Template Sequence  DADTGYG. NFNNARRLVRKLEDRGVAGACLEDKLFGR. . . . . . AQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIA
Template Known Secondary structure 

SS
S.STT


B


T......T

B


SSTT

TTTT
Template Predicted Secondary structure 



.










......













Template SS confidence 















































































   85....90. ........100.........110.........120 .........130.........140.........150.......
 
   164.....170.........180.........190.. .......200... ......210.........220.........230.........240
Predicted Secondary structure 











.
..

















Query SS confidence 




























.










. .




































Query Sequence  VEGLDAAIERAQAYVEAGAEMLFPEAITE. LAMYRQFADAV. . QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAF
Query Conservation    





 

 

 




 


     . 
        
..  

       
 

     

  

   
       
Alig confidence 




























.










..














...


















Template Conservation    





 

 

 




 


       
 
                        ...  

  

   
       
Template Sequence  GWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNNQGPVVIVPTKYYKTP. . . TDHFRDMGVSMVIWANHNL
Template Known Secondary structure  T

TT
S


SSSSTT
S


STTTTS
...T


S
Template Predicted Secondary structure 

























...





Template SS confidence 















































































   166...170.........180.........190.........200.........210.........220... ......230.........240..
 
   241........250.........260.........270......
Predicted Secondary structure 












Query SS confidence 



































Query Sequence  RAMNRAAEHVYNVLRQEGTQKSVIDTMQTRNELYES
Query Conservation   

  
       
   
             
    
Alig confidence 



































Template Conservation   

  
       
   
             
   
Template Sequence  RASVSAIQQTTKQIYDDQSLVNVEDKIVSVKEIFRL
Template Known Secondary structure  SSSTTTGGGS


Template Predicted Secondary structure 














Template SS confidence 



































   243......250.........260.........270........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions