Job Description P77541 Confidence 98.41% Date Thu Jan 5 12:30:23 GMT 2012 Rank 29 Aligned Residues 216 % Identity 18% Template d1rd5a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.02

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		7	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.													.	.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.													.	.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		G	K	A	F	R	A	A	L	T	K	E	N	.	.	.	.	P	L	Q	I	V	G	T	I	N	A	N	H	.	.	.	.	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	.	.	.	.	.	.	.	.	.	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T
Query Conservation														.	.	.	.													.	.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.													.	.	.	.																.	.	.	.	.	.	.	.	.																	.
Template Conservation																																																																										.
Template Sequence		S	D	T	M	A	A	L	M	A	K	G	K	T	A	F	I	P	Y	I	T	A	G	D	P	D	L	A	T	T	A	E	A	L	R	L	L	D	G	C	G	A	D	V	I	E	L	G	V	P	C	S	D	P	Y	I	D	G	P	I	I	Q	A	S	V	A	R	A	L	A	S	G	T	.	T	M	D	A	V	L	E
Template Known Secondary structure											T	T										T	T	S	S															T	T		S	S								S			T	T	S													T	T	T		.
Template Predicted Secondary structure																																																																										.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D	A	D	I	G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T
Query Conservation
Alig confidence																	.	.	.					.			.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.					.			.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	R	E	V	T	P	E	L	S	C	P	V	V	L	.	.	.	L	S	Y	Y	.	K	P	.	I	M	F	R	S	L	A	K	M	K	E	A	G	V	H	G	L	I	V	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	Y	V	A	A	H	S	L	W	S	E	A	K	N	N	N	L
Template Known Secondary structure							G	G	G		S	S					.	.	.				S	.			.			S			T						T	T							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T											T	T
Template Predicted Secondary structure																	.	.	.					.			.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.		.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.													.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	I	T	E	.	.	.	.	.	.	.	.	.	.	.	.	L	A	M	Y	R	Q	F	A	D	A	V	Q	V	P	I	L	A	N	I	T	E	F	G	A	T
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.																																																					.	.	.
Template Sequence		E	L	V	L	L	T	T	P	A	I	P	.	.	.	.	.	.	.	.	.	.	E	D	R	M	K	E	I	T	K	A	S	E	G	F	V	Y	L	V	S	V	N	G	V	T	G	P	R	A	N	V	N	P	R	V	E	S	L	I	Q	E	V	K	K	V	T	N	K	P	V	A	V	G	.	.	.	F	G	I	S
Template Known Secondary structure									T	T	S		.	.	.	.	.	.	.	.	.	.													S							S	S			B		T	T	S		B		T														S	S						.	.	.	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																																																					.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.											.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.										.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.
Query Sequence		P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	R	A	.	.	.	.	.	.	.	.	.	M	N	R	A	A	E	H	V	Y	N	V	L	R	Q
Query Conservation																											.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	E	H	V	K	Q	I	A	Q	W	G	A	D	G	V	I	I	G	S	A	M	V	R	Q	L	G	E	A	A	S	P	K	Q	G	L	R	R	L	E	E	Y	A	R	G	M	K	N
Template Known Secondary structure		S										T	T		S														S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions