Job Description P77541 Confidence 98.43% Date Thu Jan 5 12:30:23 GMT 2012 Rank 27 Aligned Residues 216 % Identity 17% Template d1qopa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.4

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.															.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																			.	.	.	.												.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.												.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	S	P	G	K	A	F	R	A	A	L	T	K	E	N	P	.	.	.	.	L	Q	I	V	G	T	I	N	A	N	H	.	.	.	.	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G
Query Conservation																			.	.	.	.												.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.												.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		M	E	R	Y	E	N	L	F	A	Q	L	N	D	R	R	E	G	A	F	V	P	F	V	T	L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	D	A	G	A	D	A	L	E	L	G	V	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	N	L	R	A	F	A	A	G	V	.	.	.	.
Template Known Secondary structure															T	T										T	T	S	S															T	T		S	S								S			T	T															T	T		.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																		.																				.	.	.
Query SS confidence																		.																				.	.	.
Query Sequence		I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	.	V	C	S	L	P	L	L	V	D	A	D	I	G	F	G	S	S	A	F	.	.	.	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E
Query Conservation																		.																				.	.	.
Alig confidence		.	.															.									.	.	.					.				.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																								.	.	.					.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	T	P	A	Q	C	F	E	M	L	A	I	I	R	E	K	H	P	T	I	P	I	G	L	.	.	.	L	M	Y	A	.	N	L	V	F	N	N	G	I	D	A	F	Y	A	R	C	E	Q	V	G	V	D	S	V	L	V	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	V	E	E
Template Known Secondary structure		.	.																	S	S	S					.	.	.					.					T	T													T							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G
Template Predicted Secondary structure		.	.																								.	.	.					.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.											190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	.	.	.	.	.	.	.	.	.	.	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	Q	V	P
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	P	F	R	Q	A	A	L	R	H	N	I	A	P	I	F	I	C	P	P	N	A	D	.	.	.	.	.	.	.	.	.	.	D	D	L	L	R	Q	V	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	S	G	V	T	G	A	E	N	R	G	P	L	H	H	L	I	E	K	L	K	E	Y	H	A	A	P
Template Known Secondary structure												T	T									T	T			.	.	.	.	.	.	.	.	.	.													S						S	S	S	S				S	S	S														T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.											160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.											.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	R	A	.	.	.	.	.	.	.	.	.	.	M	N	R	A	A	E	H	V	Y	N	V	L	R	Q
Query Conservation																																						.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.
Template Sequence		A	L	Q	G	.	.	.	F	G	I	S	S	P	E	Q	V	S	A	A	V	R	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	K	N	L	A	S	P	K	Q	M	L	A	E	L	R	S	F	V	S	A	M	K	A
Template Known Secondary structure						.	.	.	S	S			S										T	T		S															T	T	T
Template Predicted Secondary structure						.	.	.
Template SS confidence
		208	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions